Amycolatopsis mediterranei U32: AMED_0485
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Entry
AMED_0485 CDS
T01269
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00860
Porphyrin metabolism
amd01100
Metabolic pathways
amd01110
Biosynthesis of secondary metabolites
amd01120
Microbial metabolism in diverse environments
amd01240
Biosynthesis of cofactors
Module
amd_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
amd_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
amd_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
AMED_0485 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amd04147
]
AMED_0485 (hemB)
Enzymes [BR:
amd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
AMED_0485 (hemB)
Exosome [BR:
amd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
AMED_0485 (hemB)
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Gene cluster
GFIT
Motif
Pfam:
ALAD
Malate_DH
Motif
Other DBs
NCBI-ProteinID:
ADJ42306
UniProt:
A0A0H3CYF5
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Position
489799..490725
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AA seq
308 aa
AA seq
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MRRLVGETTLRPRQLILPMFVAEGIDSPRPISSMPGVVQHTRDTLRKAAVDAVNAGVGGL
MLFGIPATRDAEGSGAVDEKGILNVALRDLRHELGDATVLMADTCLDEFTDHGHCGVLDA
DGGVDNDATLRIYAQMAIAQVEAGAHVLGPSGMMDGQIGVIRRALDEVGHKEAAILAYSA
KYASAFYGPFREAVDSQLKGDRKTYQQDPGNGREALREIELDLAEGADMIMVKPALAYLD
VIKAAADISPVPVAAYNISGEYAMVEAAAANGWLDRERTVLEVLTSIRRAGADLILSYWA
AEAAAWLD
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggctggtgggcgaaacgacgctgcggccacgccagctgatcctcccgatgttc
gtcgccgaagggatcgactcgccgcggccgatttcgagcatgcccggcgtcgtccagcac
acccgcgacacgctgcggaaggccgccgtcgacgcggtcaacgccggcgtcggtggcctc
atgctgttcggcatcccggccacgcgcgacgccgagggctccggagccgtcgacgaaaag
ggcatcctcaacgtggccctgcgcgacctccgccacgagctgggtgacgccaccgtgctg
atggccgacacctgcctcgacgagttcaccgaccacggccactgcggcgtcctcgacgcc
gacggcggggtcgacaacgacgccaccctgcggatctacgcccagatggccatcgcgcag
gtcgaagccggggcgcacgtgctcgggccgtccgggatgatggacggccagatcggtgtc
atccgccgggcgctcgacgaggtcgggcacaaggaggcggcgatcctggcgtactccgcg
aagtacgccagcgcgttctacggccccttccgcgaggccgtcgactcgcagctcaagggc
gaccgcaagacctaccagcaggacccgggcaacggccgcgaggcgctgcgcgagatcgag
ctggacctcgccgagggcgcggacatgatcatggtcaagcccgcgctggcctacctggac
gtcatcaaggcggccgcggacatctccccggtgccggtggcggcctacaacatctcgggc
gagtacgcgatggtcgaggccgcggcggcgaacggctggctggaccgcgagcggacggtt
ctcgaggtgctgacgtcgatccgccgcgcgggcgccgacctgatcctgagctactgggcc
gcggaggccgctgcctggctggactga
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