Amycolatopsis mediterranei U32: AMED_0620 Help Entry AMED_0620         CDS       T01269                                  Symbol rifD Name (GenBank) rifamycin polyketide synthase   KO K15672   rifamycin polyketide synthase modules 7 and 8 Organism amd  Amycolatopsis mediterranei U32 Pathway amd01051   Biosynthesis of ansamycins amd01052   Type I polyketide structures Brite KEGG Orthology (KO) [BR:amd00001]  09100 Metabolism   09109 Metabolism of terpenoids and polyketides    01052 Type I polyketide structures     AMED_0620 (rifD)    01051 Biosynthesis of ansamycins     AMED_0620 (rifD)  09180 Brite Hierarchies   09181 Protein families: metabolism    01008 Polyketide biosynthesis proteins [BR:amd01008]     AMED_0620 (rifD) Polyketide biosynthesis proteins [BR:amd01008]  Polyketide synthase (PKS)   Modular type I PKS    cis-AT PKS     Rifamycin PKS      AMED_0620 (rifD) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Acyl_transf_1 ketoacyl-synt KR Ketoacyl-synt_C PKS_DH_N SpnB_Rossmann PP-binding KAsynt_C_assoc Docking RhiE-like_linker Epimerase PS-DH Thiolase_N adh_short CurL-like_PKS_C GDP_Man_Dehyd Shikimate_DH Polysacc_synt_2 ACP_syn_III Sacchrp_dh_NADP Motif Other DBs NCBI-ProteinID:  ADJ42440 UniProt:  A0A0H3CWL2 LinkDB All DBs Position 664444..669630 Genome browser AA seq 1728 aa AA seqDB search MADEGQLRDYLKRAIADARDARTRLREVEEQAREPIAIVAMACRYPGGVSSPEDLWRLVA EGTDAVSAFPGDRGWDVDGLVDPDPDRPGTTYTDQGGFLHEAGLFDAGFFGISPREAVAM DPQQRLLLETSWEAIERTGTDPLSLKGSDIGVFTGVASMGYGAGGGVVAPELEGFVGTGA APCIASGRVSYVLGFEGPAVTVDTGCSSSLVAMHLAAQALRRGECSMALAGGAMVMAQPG SFVSFSRQRGLALDGRCKAFSDSADGMGLAEGVGVIALERLSVARERGHRVLAVLRGIAV NQDGASNGLTAPNGPSQQRVIRAALAEAGLSPSDVDAVEGHGTGTTLGDPIEAQALLATY GKGRDPEKPLWLGSVKSNLGHTQAAAGVASVIKMVQALRHGVLPPTLHVDRPSTEVDWSA GAVSLLTEAREWPREGRPRRAGVSSFGISGTNAHLILEEAPEEEPPVAEAPSAGVVPVVV SARGALAGQAGRLAAFLEASDEPLVTVAGALICGRSRFGDRAVVVAGTRAEATAGLAALA RGESAADVVTGTVAASGVPGKLVWVFPGQGSQWVGMGRELLEASPVFAARIAECAAALEP WIDWSLLDVLRGEGDLDRVDVVQPASFAVMVGLAAVWSSVGVVPDAVLGHSQGEIAAACV SGALSLQDAAKVVALRSQAIAAKLAGRGGMASVALSEEDAVARLRHWADRVEVAAVNSPS SVVIAGDAEALDQALEALTGQDIRVRRVAVDYASHTRHVEDIQEPLAEALAGIEAHAPTL PFFSTLTGDWIREAGVVDGGYWYRNLRNQVGFGPAVAELLGLGHRVFVEVSAHPVLVQAI SAIADDTDAVVTGSLRREEGGLRRLLTSMAELFVRGVDVDWATMVPPARVDLPTYAFDHQ HYWLRYVETATDAAGPVVRLPQTGGLVFTTEWSLKSQPWLAEHTLEDLVVVPGAALVELA VRAGDEAGTPVLDELVIETPLVVPERGAIRVQVTVSGPDDGTRTLEVHSQPEDATDEWTR HATGTLSATPDESSGFDFTAWPPPGARQLDGVPAIWRAGDEIFAEVSLPDDADAEAFGIH PALLDAALHPALPGDDGLTQPMEWRGLTLHAAGASTLRVRLVPGGFLEAADGAGSLVVTA KEVALRPVTIARSRTTTRDSLFQLNWIELPESGVVAAADDTEVLEVPAGDSPLAATSRVL ERLQTWLTEPEAEQLVVVTRGAVPAGDTPVTDPAAAAVWGLVRSAQAENPDRIVLLDTDG EVPLGAVLAGGEPQVAVRGTALYVPRLARADAAPVSGLHGTVLVSGAGVLGEIVARHLVT RHGVRKLVLASRRGLDADGAKDLVTDLTGEGADVSVVACDLADRNQVAALLADHRPASVI HTAGVLDDGVIGTLTPERLAKVFAPKVDAVRHLDELTRDLDLDAFVVFSSGSGVFGSPGQ GNYAAANAFLDAAMASRRAAGLPGLSLAWGLWEQATGMTAHLGGTDQARMSRGGVRPITA EEGMALFDTALGAQPALLVPVKLDLREVRAGGAVPHLLRGLVRAGRRQAQAASTVDNQLL GRLAGLGAPEQEALLVDLVRGQVAAVLGHAGPDAVRADTAFKDAGFDSLTSVDLRNRLRE STGLKLPATLAFDYPTPLVLARHLRDELGAGDDALSVVHARLEDVEALLGGLRLDESTKT GLTLRLQGLVARCNGVNDQTGGETLADRLEAASADEVLDFIDEELGLT NT seq 5187 nt NT seq  +upstreamnt  +downstreamnt gtggctgacgagggacaactccgcgactacctcaagcgggccatcgccgacgcccgcgac gcccgcacgcggctgcgcgaggtcgaggagcaggcgcgggagccgatcgccatcgtcgcc atggcgtgccggtacccgggcggggtgtcctcgcccgaggacctgtggcggctggtggcc gaggggaccgacgccgtctccgcgttccccggcgaccgcggctgggacgtcgacgggctc gtcgacccggaccccgaccgcccgggcacgacgtacacggaccagggtggcttcctccac gaggccggcctcttcgacgcggggttcttcgggatctcgccgcgggaggccgtcgcgatg gacccgcagcagcggctgctgctggagacgtcctgggaggccatcgaacgcaccggcacc gacccgctttcgctgaagggcagcgacatcggcgtcttcaccggcgtcgcgagcatgggt tacggcgccggtggcggcgtggtcgcgccggagctggagggtttcgtcggcaccggtgcg gcgccgtgcatcgcgtccggccgggtgtcgtacgtcctcggcttcgaaggcccggcggtc accgtcgacaccgggtgttcgtcgtcgctggtggcgatgcacctcgccgcgcaggcgctg cggcggggtgagtgctcgatggctctggccggcggcgcgatggtgatggcccagccgggt tcgttcgtgtccttctcgcggcaacgcgggctcgccctggacgggcgctgcaaggcgttt tcggacagcgccgacgggatgggactggccgagggcgtcggcgtcatcgcgctggaacgg ctgtcggtcgcccgtgagcgtgggcaccgggtgctggccgtgctgcgcggtatcgcggtg aaccaggatggcgcgtcgaacggcttgaccgccccgaacggcccgtcccagcagcgggtg atccgcgccgcgctggccgaagccgggctgtcgccgtccgatgtggacgccgtcgaaggg cacgggacgggcacgacgctgggcgatccgatcgaagcgcaggcgttgctggccacctac ggcaagggccgggacccggagaagccgctctggctgggctcggtgaagtcgaacctcggg cacacgcaagcggccgcgggcgtggccagcgtgatcaagatggtgcaggcgctgcgccac ggcgtgctgcccccgacgctgcacgtcgaccggccgtccaccgaagtcgactggtcggcc ggtgcggtctcgctgttgacggaggctcgggagtggccgcgcgaagggcggccgcgccgg gccggggtgtcctcgttcgggatcagcgggaccaacgcgcacctcatcctggaggaagcg cccgaggaggagccgcccgtcgccgaagcgccttccgccggagtggtgcccgtggtggtg tcggctcgtggggccctggcgggtcaggccggccggctggccgcgttcctcgaggcgtcc gacgagccgttggtgaccgtcgccggggcgctgatctgcggccggtcccggttcggcgac cgggccgtcgtggtggcgggcacgcgcgcagaggcgacggccgggctggccgcgctggcc cgcggcgaaagcgccgccgacgtcgtgaccggcacggtcgcggcctcgggcgtgccgggc aagctcgtgtgggtgttcccgggccagggttcgcagtgggtgggcatgggccgggagctc ctcgaagcctcgccggtgttcgccgcgcggatcgcggagtgcgcggctgccctcgaaccg tggatcgactggtcgctgctggacgtcctccgtggcgagggcgacctcgaccgcgtcgac gtggtgcagcccgcgagtttcgcggtgatggtcggcctggccgcggtgtggtcgtccgtc ggggtggtgcccgacgcggtgctcgggcactcgcagggggagatcgcggcggcgtgcgtg tcgggggcgttgtcgctgcaggacgcggcgaaggtggtcgcgttgcgcagccaggcgatc gcggcgaagctggccggccgcggcggcatggcctcggtcgcgctgagcgaggaagacgcg gtcgcgcggttgcggcactgggcggaccgggtcgaggtggccgcggtcaacagcccgtcg tcggtggtgatcgccggcgacgccgaagccctcgaccaggccctcgaagcactgaccggc caggacatccgggtccggcgggtggcggtggactacgcctcgcacacccggcacgtcgaa gacatccaggagcccctcgccgaggcactggccgggatcgaggcgcacgcgccgaccctg ccgttcttctcgaccctcaccggtgactggattcgcgaagcgggcgtcgtggacggcggc tactggtaccggaacctgcgcaaccaggtcggtttcggcccggcggtggccgagctgctc ggcctcggccaccgggtgttcgtcgaggtcagcgcgcaccccgtgctcgtccaggcgatc agcgcgattgccgacgacaccgacgcggtcgtcaccggctcgctgcggcgcgaggagggc ggcctgcggcggctgctgacgtcgatggccgagctgttcgtccgcggagtcgacgtggac tgggccacgatggtgccgccagcgcgggtcgatttgccgacctacgccttcgaccaccag cactactggctgcggtacgtcgagaccgcgaccgacgcggccggtccggtggtccggctg ccgcagacgggcggcctggtcttcaccaccgagtggtcgctgaagtcacagccgtggctg gccgagcacaccctggaagacctggtcgtcgtccccggcgcggcactggtcgagctggcc gtccgggccggtgacgaggccgggaccccggtgctggacgaactcgtcatcgagacgccc ctggtcgtgccggaacgcggcgcgatccgggtgcaggtcacggtgagcggaccggacgac ggcacacggaccctggaagtgcattcccagcccgaagacgccaccgacgaatggacccgg cacgccaccggcacgctgtcggcgaccccggacgaaagcagcgggttcgacttcacggcc tggccgcccccgggcgcccggcagctcgacggcgttccggcgatctggcgggccggcgac gagatcttcgccgaagtctccctgcccgacgatgcggacgccgaggcattcggcatccac cccgcgctcctggacgcggccctgcaccccgccctgcccggcgatgacggtctgacgcag cccatggaatggcgtggcctgacgctgcacgccgcgggggcgtcgacgctgcgggtccgg ttggtgcccggcgggttcctggaagcggccgacggcgccggcagcctggtcgtcacggcg aaggaggttgccctccgcccggtgacgatcgcgcggtcgcgcaccaccacccgagactcg ctgttccagctgaactggatcgagctgcccgagagtggcgtggtggccgcggcagacgac accgaggtgctggaggtgcccgcgggcgattccccgctggcggcgacctcccgagtcttg gagcggctccagacctggctgaccgagcccgaggcggaacagctggtcgtcgtgacgcgc ggcgcggtgcccgccggggacaccccggtgaccgacccggccgcggcggcggtctggggc ctggtccggtccgcgcaggcggagaacccggaccggatcgtcctgctcgacaccgacggc gaagtcccgctgggtgcggtgctggccggcggcgagccgcaggtcgcggtgcgcggcacg gcgctgtacgtcccgcgcctggcccgcgccgacgcggccccggtatccggtctacatggg acggtcctcgtctccggtgccggtgtgctcggcgagatcgtggcgcggcacctggtcacc cgccacggcgtgcgcaagctggtgctcgccagccgccgcggcctggacgccgacggcgcg aaggacctcgtcaccgacctcaccggcgagggcgcggacgtgtccgtcgtcgcctgcgac ctggccgatcggaaccaggtggccgcgctgctggccgaccaccgcccggcgagcgtcatc cacacggcgggcgtcctcgacgacggcgtcatcgggacgctgaccccggagcggctggcc aaggtgttcgcgcccaaggtcgacgcggtccgccatctcgacgagctgactcgcgacctc gacctcgacgcgttcgtcgtgttctcctccggctccggcgtgttcggttcgccggggcag ggcaactacgcggcggcgaacgcgttcctggacgcggcgatggcgagccgccgcgcggcg ggtcttcctggtctctcgctggcgtggggcctgtgggaacaggccaccggcatgaccgcg cacctcggcggcaccgaccaggcccggatgagccggggcggggtgcggccgatcacggcc gaggaaggcatggccctgttcgacacggcactgggtgcgcagcccgcgctgctcgtgccg gtcaagctcgacctgcgggaggtgcgggccggcggggccgtgccgcacctgctgcgcggg ctggtccgggccgggcggcggcaggcccaagccgcgtccacagtggacaaccagctgctg ggccggctggccgggctgggcgcgcccgagcaggaggcgctgctcgtcgacctcgtgcgc ggccaggtcgcggcggtgctcgggcacgccgggccggacgcggtccgcgccgacacggcg ttcaaggacgccgggttcgactcgctcacctcggtcgacctgcgcaaccggctgcgggag agcaccgggctgaagctgcccgccacgctcgccttcgactacccgaccccgctggtcctc gcccggcacctgcgtgacgagctcggggccggcgacgacgcgctttcggtggtgcacgcg cggctcgaagacgtcgaggcgctgctcggcgggctgcgcctcgacgaatccacgaagacc ggtctcaccctccggctgcagggcctggtcgcccggtgcaacggcgtgaacgaccagacc ggcggcgaaacgctggcggaccggctcgaggccgcgtccgccgacgaagtcctcgacttc atcgacgaggagctgggtctcacctga

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