Amycolatopsis mediterranei U32: AMED_0996
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Entry
AMED_0996 CDS
T01269
Symbol
fadD
Name
(GenBank) long-chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00061
Fatty acid biosynthesis
amd00071
Fatty acid degradation
amd01100
Metabolic pathways
amd01212
Fatty acid metabolism
amd02024
Quorum sensing
amd04146
Peroxisome
Module
amd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AMED_0996 (fadD)
00071 Fatty acid degradation
AMED_0996 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AMED_0996 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMED_0996 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
amd01004
]
AMED_0996 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amd04147
]
AMED_0996 (fadD)
Enzymes [BR:
amd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AMED_0996 (fadD)
Lipid biosynthesis proteins [BR:
amd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AMED_0996 (fadD)
Exosome [BR:
amd04147
]
Exosomal proteins
Exosomal proteins of breast milk
AMED_0996 (fadD)
Exosomal proteins of breast cancer cells
AMED_0996 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ADJ42814
UniProt:
A0A0H3CY22
LinkDB
All DBs
Position
complement(1053193..1054869)
Genome browser
AA seq
558 aa
AA seq
DB search
MMPITASTTPPGLPASLDYPEVPVGSILAAGAARWGDRTAFAHDGRSLTYAETHRAACRF
ANALRERGIGRGDVVALHLPNCLAFPVAYYGTLLAGATFSPANPLLPPDDLAFQLADCEA
AAVVTFGPVAGALASVADRIPARFTVVVQPVADLPDGAVEFEAFHASQPEIPPSVDLDLS
EDLAHLAYTGGTTGRSKGVRLSHRNVVVNTLQHACWGTGSVPALDERGDVTIDQIGGEDE
WPTRLGTGVAINLTPWFHAMGIIGGLNAAVVAGTSMVLHTRFDPAAYVADAERLRVTGIG
GAPALFAALLATPSFHTADLSSVRAIGSGAAPMNHAMINALRTRFPDVVVTEGYGLTEAT
MGAVISPTYRSGTRKVGSVGLPIFDTEVKIVPAEGGEDPLPPGERGEVCLRGPQIMLGYR
NRPEETAAALVDGWLHTGDIGILDPDGYLSIVDRKKDMLLYKGYNVFPRELEELLITMPG
VAAAAVVGRPDAEVGELPVAFVVPRGSLDADGLMAAVNEKVLPYKRLREVHVVEQIPVSA
AGKVLKRELRQQLIGELG
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtgatgccgatcaccgcgtcgacgacgccgcccggtctgcccgcctccctcgactacccc
gaagtccccgtcgggtcgatcctggcggccggtgccgcgcgctggggcgaccggaccgcc
ttcgcccacgacggccgcagtctcacctacgccgagacccaccgggccgcctgccggttc
gccaacgccctgcgcgaacgcggcatcggccgcggcgacgtcgtagcgctgcacctgccg
aactgcctggccttcccggtcgcctactacggcacgctgctggccggggccaccttcagc
ccggcgaacccgctgctcccgccggacgacctcgccttccagctcgccgactgcgaggcg
gccgccgtggtgacgttcggcccggtcgccggggcactggcgagcgtcgccgaccggatc
ccggcgcggttcaccgtcgtcgtccagccggtcgccgacctgcccgacggcgccgtcgag
ttcgaggcgttccacgcttcgcagcccgagattcccccgtccgtggatctcgacctctcc
gaagacctggcccacctggcctacacgggtggcaccaccggccggtccaagggcgtgcgg
ctgtcgcaccgcaacgtcgtggtcaacacgctgcagcacgcctgctggggcaccggctcg
gtcccggcgctcgacgagcgcggcgacgtcacgatcgaccagatcggcggcgaggacgag
tggccgacgcgcctgggcaccggcgtcgcgatcaatctgacgccgtggttccacgcgatg
ggcatcatcggcggcctcaacgcggcggtggtcgccgggacgtcgatggtcctgcacacg
cgtttcgacccggcggcgtacgtcgccgacgccgagcggctccgcgtcaccggcatcggc
ggcgcgccggcgctgttcgcggccttgctcgcgacgccgtcgttccacaccgccgacctc
tcgtcggtccgcgcgatcggttcgggtgcggcgccgatgaaccacgcgatgatcaacgcg
ctccgcacgcgcttccccgacgtggtggtcaccgagggctacggcctgaccgaggcgacg
atgggcgcggtgatctcgccgacgtaccggtcgggcacgcgcaaggtcggctcggtgggc
ctgccgatcttcgacacggaggtcaagatcgtccccgccgagggcggcgaggacccgctg
ccgccgggcgagcggggcgaggtctgcctgcgcgggccgcagatcatgctcggctaccgc
aaccgcccggaggagacggcggcggccttggtggacggctggctgcacaccggcgacatc
ggcatcctcgacccggacggctacctgtccatagtggaccgcaagaaggacatgctgctg
tacaagggttacaacgtcttcccgcgcgagctcgaggagctgctcatcacgatgccgggc
gtcgcggcggccgcggtcgtcggccgccccgacgccgaggtcggcgagctgccggtggcg
ttcgtggtgccccgcgggtcgctggacgccgacgggctgatggccgcggtcaacgagaag
gtgctgccgtacaagcggttgcgggaggtgcacgtggtcgagcagatcccggtgtccgcg
gcggggaaggtgctgaagcgcgaactgcggcagcagctgatcggcgagctcggctag
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