KEGG   Amycolatopsis mediterranei U32: AMED_1007
Entry
AMED_1007         CDS       T01269                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
amd  Amycolatopsis mediterranei U32
Pathway
amd00521  Streptomycin biosynthesis
amd00523  Polyketide sugar unit biosynthesis
amd00525  Acarbose and validamycin biosynthesis
amd00541  Biosynthesis of various nucleotide sugars
amd01055  Biosynthesis of vancomycin group antibiotics
amd01100  Metabolic pathways
amd01110  Biosynthesis of secondary metabolites
amd01250  Biosynthesis of nucleotide sugars
Module
amd_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:amd00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    AMED_1007 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    AMED_1007 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    AMED_1007 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    AMED_1007 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    AMED_1007 (rfbB)
Enzymes [BR:amd01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     AMED_1007 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 3Beta_HSD NAD_binding_4 RmlD_sub_bind NAD_binding_10 NmrA
Other DBs
NCBI-ProteinID: ADJ42825
UniProt: A0A0H3CXP4
LinkDB
Position
1064630..1065619
AA seq 329 aa
MRVLVTGGAGFIGSHYVRQVLTGAYPTLRDAEVVVLDKLTYAGNEANLAPVAADPRLKFV
RGDICDTALVTEVMTGVDLVVHFAAESHVDRSILGAADFVLTNVLGTQNLLQAALEAGVG
KFVHVSTDEVYGSIEHGSWTEDHLLEPNSPYSASKASSDLVARSFFRTHGLPVCITRCSN
NYGPYQFPEKVIPLFVTSLLDGGKVPLYGDGLNVRDWLHVDDHCHGIQLVADGGRPGEIY
NIGGGTELTNRSLTEKLLEAVGASWDSVEPVEDRKGHDRRYSVDITKISRELGYAPRVSF
EDGLAATVAWYRDNRAWWEPLAGRAALKK
NT seq 990 nt   +upstreamnt  +downstreamnt
atgcgggtcctggtcaccggtggtgccggcttcatcgggtcgcactacgtccggcaggtg
ctgaccggcgcctacccgacgctgcgcgacgccgaggtggtcgtgctggacaaactcacc
tacgcgggtaacgaagccaacctggccccggtcgccgccgacccgcggctgaagttcgtc
cgcggcgacatctgcgacacggcgctggtcaccgaggtgatgaccggtgtggacctcgtc
gtgcacttcgcggcggagtcccatgtggaccgctcgatcctcggcgcggccgacttcgtg
ctgacgaacgtgctcggcacgcagaacctgctgcaggcggccctggaagccggcgtcggc
aagttcgtgcacgtgtccaccgacgaggtgtacggctcgatcgagcacggttcgtggacc
gaagaccacctgctggagccgaattcgccctattcggcgtcgaaggcgtcctccgatctg
gtggcgcggtcgttcttccgcacccacgggctgccggtgtgcatcacccggtgttccaac
aactacggtccgtaccagttcccggagaaggtcatcccgctgttcgtcaccagcctgctc
gacggggggaaggtgccgctctacggtgacgggctcaacgtccgtgactggctgcacgtg
gacgaccactgccacggcatccagctggtcgccgacggcggccggccgggcgagatctac
aacatcggcggcggcaccgagctgaccaaccggtcgctgacggagaagctgctggaggcg
gtcggcgcgagctgggacagcgtcgagccggtcgaagaccgcaagggccacgaccgccga
tactcggtggacatcacgaagatcagccgggagctggggtacgctccgcgcgtctccttc
gaggacggtctggccgcgacagtggcgtggtaccgggacaatcgcgcgtggtgggagccg
ctggccggacgggccgcgctgaagaaatag

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