Amycolatopsis mediterranei U32: AMED_1108
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Entry
AMED_1108 CDS
T01269
Name
(GenBank) ATP-dependent RNA helicase
Organism
amd
Amycolatopsis mediterranei U32
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
ADJ42924
UniProt:
A0A0H3CYC0
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Position
complement(1164514..1166310)
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AA seq
598 aa
AA seq
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MKISARDQGLLPVECRADPRLCALVTREAITLTAEIPTTEQTPAVALEHSETGPAALDTS
HPLQAGVEVEPENPTFASFGVKPEIVKALGEAGIERTFAIQELTLPLAMAGDDLIGQART
GMGKTLGFGVPLLHRVQVPGDGTPQVLVVVPTRELCIQVANDLKGAGKHLGIRTLAIYGG
RPYEPQIEALRKGIDVVIGTPGRLLDLAEQQHLVLGKVRGLVLDEADEMLDLGFLPDIER
ILRMVPDERQTMLFSATMPGPIITLARTFLRQPTHIRAEENDASAIHERTTQFVYRAHSM
DKPEVIARVLQAEDRGLTMIFSRTKRTAQKVADDLVERGFAAAAVHGDLGQGAREQALRA
FRSGKVDVLVATDVAARGIDIDDVTHVINYQCPDDEKTYVHRIGRTGRAGRTGVAVTLVD
WDEMPRWKLISDTLGLDKPEPVETYSSSPHLFEDLGIPEGTKGRLPLANRTRAGLAAEEE
EDLGGKKRGPRGRGKAGEAAAEEAPRKRARAPRKRTRGGARSAEAIEAADNAAATPADAE
AGSSEGRTRSRRRTRSGNAPEATGPAVEKEAGENAERPARRRRRRRPAATSDTPASAD
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
ttgaagatcagcgccagggaccagggtttactcccggtcgagtgtcgagcggacccacgg
ctgtgcgcgctggtcacgagagaggcgatcaccctgaccgcagaaattcccacaaccgaa
cagacccccgccgtcgcgctggaacacagcgagaccggcccggccgcgctcgacacctca
cacccgctgcaggcgggcgtcgaggtcgagcccgagaacccgaccttcgcgtccttcggc
gtcaagccggagatcgtcaaggccctgggcgaagccggcatcgagcgcaccttcgcgatc
caggagctcaccctgccgctggcgatggccggcgacgacctgatcggccaggcccgcacc
ggcatgggcaagacgctgggcttcggcgtcccgctgctgcaccgcgtgcaggtccccggc
gacggcaccccgcaggtgctggtcgtggtgccgacccgcgagctgtgcatccaggtcgcc
aacgacctcaagggcgccggcaagcacctgggcatccgcaccctggccatctacggcggc
cgcccgtacgagccgcagatcgaggccctgcgcaagggcatcgacgtcgtgatcggcacc
ccgggccgcctgctcgacctggccgagcagcagcacctggtgctcggcaaggtccgcggc
ctggtgctcgacgaggccgacgagatgctcgacctgggcttcctgcccgacatcgagcgc
atcctccggatggtgccggacgagcggcagaccatgctgttctcggccaccatgccgggc
ccgatcatcacgctggcccgcacgttcctgcgccagccgacgcacatccgcgccgaagaa
aacgacgcgagcgcgatccacgagcgcaccacccagttcgtctaccgggcgcactcgatg
gacaagcccgaggtgatcgcccgcgtcctgcaggccgaggaccgcggcctcacgatgatc
ttcagccgcaccaagcgcaccgcgcagaaggtggccgacgacctggtcgagcgcggcttc
gcggccgccgccgtgcacggcgacctgggccagggcgcccgcgagcaggccctgcgcgcg
ttccgctccggcaaggtcgacgtcctggtcgccaccgatgtcgcggcccgcggcatcgac
atcgacgacgtcacccacgtcatcaactaccagtgcccggacgacgagaagacctacgtc
caccgcatcggccgcaccggccgcgcgggccggaccggcgtcgccgtcaccctcgtcgac
tgggacgagatgccgcgctggaagctcatctcggacacgctgggcctcgacaagccggag
ccggtggagacgtactcgtcgtcgccgcacctgttcgaggacctgggcattccggagggc
acgaagggccggctgccgctggccaaccgcacccgtgcgggcctggccgccgaggaggaa
gaggacctgggcggtaagaagcgcggcccgcgtggccggggtaaggccggcgaggccgcc
gcggaagaggcaccgcgcaagcgcgcccgggccccgcgcaagcggacccgtggtggtgcg
cgctcggccgaggcgatcgaggccgcggacaacgcggccgccactcccgcggacgccgag
gccggttcgtcggagggccgcacccgcagccgccgccgcacccgcagcggcaacgccccg
gaggcgaccggcccggccgtcgagaaggaggccggcgagaacgccgagcgtccggctcgc
cggcgccgccgtcgccgtccggccgcgacgtctgatacacctgcttcggcagactga
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