Amycolatopsis mediterranei U32: AMED_1204
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Entry
AMED_1204 CDS
T01269
Name
(GenBank) permease component I of ABC-type spermidine/putrescine transport system
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMED_1204
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amd02000
]
AMED_1204
Transporters [BR:
amd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AMED_1204
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
DUF1195
Motif
Other DBs
NCBI-ProteinID:
ADJ43019
UniProt:
A0A0H3CYL1
LinkDB
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Position
1271737..1272567
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AA seq
276 aa
AA seq
DB search
MTAFFYRRPKLRLGFLLSAPLLWLGLAYLGALAALFVTAFWHTDAFTGQVVVDWSLGNFE
TLFTDAVYRTITFRTVGIAALVTVIDAVVAFPMAFAMAKLASPRAQRILVIAVMTPLWAS
YLVKAYAWRSMLSGNGALSSISPGYGVTATIVTLSYLWLPYMILPIYAGLDRLPDSLVDA
SGDLGARSLRTFRSVILPLTFPAIVAGSIFTFSLSLGDYIAVKIVGGTSQMLGNVVYDNI
GAANNLPFAATVATVPVVIMLGYLAAVRRTGALDNL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccttcttctaccggagacccaagctgcgcctgggtttcctgctctcggccccg
ctgctctggctcggcctggcctacctgggcgcgctcgccgcgctgttcgtcacggcgttc
tggcacaccgacgccttcaccggccaggtcgtcgtcgactggtcgctgggcaacttcgag
acgctgttcaccgacgcggtctaccgcacgatcaccttccgcacggtcgggatcgcggcg
ctggtcacggtgatcgacgcggtcgttgcgttcccgatggcgttcgcgatggccaagctc
gcttcgccgcgcgcgcagcggatcctggtgatcgcggtgatgaccccgctgtgggcgagc
tacctggtgaaggcgtacgcgtggcggtcgatgctgtccggcaacggcgcgctgagctcg
atttcgcccggttacggcgtcacggccacgattgtcacgctgtcctacctctggctgccg
tacatgatcctgccgatctacgccggcctcgaccggctgccggattccctggtggacgct
tcgggcgacctcggcgcccgctcactgaggacgttccgctcggtgatcctgccgctgacg
ttcccggcgatcgtggcgggctcgatcttcacgttttcgctgtccctgggcgactacatc
gcggtgaagatcgtcggcggcacgtcccagatgctcggcaacgtcgtctacgacaacatc
ggcgcggcgaacaacctcccgttcgcggcgacggtggcgacggtgccggtcgtgatcatg
ctcggctatctggccgcggtgcgccgcaccggcgcgctcgacaacctctag
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