Amycolatopsis mediterranei U32: AMED_1233
Help
Entry
AMED_1233 CDS
T01269
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd03420
Nucleotide excision repair
amd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMED_1233
03430 Mismatch repair
AMED_1233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amd03400
]
AMED_1233
Enzymes [BR:
amd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMED_1233
DNA repair and recombination proteins [BR:
amd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMED_1233
MMR (mismatch excision repair)
Other MMR factors
AMED_1233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADJ43048
UniProt:
A0A0H3CXI4
LinkDB
All DBs
Position
1310591..1312675
Genome browser
AA seq
694 aa
AA seq
DB search
MTGVLSTKSINRLLDGLDPEQRAAASAPRGPVCVLAGAGTGKTRTITHRIAHLVRSGHVS
AGQVLAVTFTTRAAGEMRTRLRGLGVEAAQALTFHAAARRQLRYFWPRVVGDRPWDLLEN
KLRYVGQAANRAKLGTEVEILRDLASEIEWAKASLISPDDYPAVTARAQRDIPAPAAQVA
EVYRTYEELKNAAQVLDFDDLLLHTTAVLEEHGAVAEEFRERYRCFVVDEYQDVTPLQQR
LLDAWLGGRDDLTVVGDANQTIYSFGGASPRPLLEFTRRYPDATVVRLERDYRSTPEVVA
LANRVIGAARGRPAGSRLKLIGQRPPGPEPRFAEFDDEAVEAGAVARRVRELLDGGVSAS
EIAILYRVNAQSEAYESALAEAGIPYLVRGGERFFNRTEVRQAMSALRMASGDGSSDLVT
TVRSVLARVGLTESPPAGGAAKERWDALLAIVELAEELASTVADADLPRFCAELDQRAAA
QHPPTVEGVTLASLHAAKGLEWDAVFLVGLAEGTMPILHAGDDEAAIEEERRLFYVGVTR
AREHLWLSWALARTPGARRNRRRSRFLYGLVPEDHPAARAARSQQKPASPVKTRCRVCGG
PLLETIDIKLGRCGRCPSTVDEGLLERLKTWRGDRARELKVPTFVVFTDATLMAIAEQRP
ADEAALVSISGIGATKLERFGAEILGVVRASAES
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggcgtactttccaccaagagcatcaaccgtctgctcgatggcctcgaccccgag
cagcgcgccgccgccagtgccccgcgggggccggtctgcgtgctcgccggcgccggcacg
ggcaagacccgcacgatcacccaccggatcgcccacctcgtccggtccgggcacgtttcc
gccggtcaggtcctcgccgtgacgttcacgacgcgggccgcgggggagatgcggacgcgg
ctgcggggcctcggcgtcgaagctgcgcaggccctgacgttccacgccgccgcccgccgg
cagctgcggtacttctggccgcgcgtggtcggcgaccggccgtgggacctgctggagaac
aagctgcggtacgtcggccaggccgcgaaccgggccaagctcggcaccgaggtcgagatc
ctgcgtgacctggcgagcgagatcgagtgggcgaaggcgtcgctgatcagcccggacgac
tacccggccgtcaccgcgcgcgcccagcgggacatcccggcgccggcggcgcaggtcgcc
gaggtgtaccgcacctacgaagaactgaagaacgccgcgcaggtgctcgacttcgacgac
ctcctgctgcacacgaccgcggtgctcgaggagcacggcgccgtcgccgaagagttccgg
gagcgttaccgctgcttcgtcgtcgacgagtaccaggacgtcacgccgctgcagcagcgc
ctgctcgacgcgtggctcggcggccgcgacgacctgaccgtcgtcggcgacgccaaccag
accatctactccttcggcggtgcgtcgccgcggccgctgctggagttcacccggcgctac
ccggatgccaccgtcgtccgcctcgagcgcgactaccggtcgacgcccgaggtcgtcgcg
ctggccaaccgggtgatcggcgcggcgcggggacggccggcgggctcgcggctgaagctg
atcggacagcggccgccggggccggagccgcgcttcgccgagttcgacgacgaggcggtc
gaggccggggccgtcgcccgccgggtgcgcgagctgctcgacggcggcgtctcggcgagc
gagatcgcgatcctctaccgggtgaacgcccagtccgaggcctacgagtcggcgctggcc
gaggccggcatcccgtacctggtccgcggcggcgagcggttcttcaaccggacggaggtc
cggcaggcgatgtccgcgctgcggatggcgagcggtgacggcagctccgacctggtcacg
acggtgcgttcggtgctcgcccgggtcggcctgaccgagtcgccgccggccggcggcgcg
gcgaaggaacgctgggacgcgctcctggcgatcgtcgaactggccgaagagctcgcttcg
acggtcgcggacgcggacctgccccgcttctgcgccgagctcgaccagcgcgccgccgcc
cagcacccgccgacggtcgagggcgtgacgctggcgtcgctgcacgcggcgaagggcctg
gagtgggacgcggtgttcctcgtcggcctcgccgagggcacgatgccgatcctgcacgcc
ggcgacgacgaagcggcgatcgaggaggagcggcggttgttctacgtcggcgtcacccgg
gcccgcgagcacctgtggctgtcctgggcgctggcccgcacaccgggcgcgcggcgcaac
cggcggcgcagccggttcctctacggcctggtcccggaggaccacccggccgccagggcc
gcgcggtcccagcaaaagccggcgtcgccggtcaagacgcgctgccgcgtctgcggcggg
ccgctgctggagaccatcgacatcaagctgggccgctgcgggcgatgcccgtccacagtg
gatgagggcctgctggagcggctgaagacgtggcgcggcgaccgggcgcgcgagctcaag
gtgccgacgttcgtggtgttcacggacgccacgctgatggccatcgccgagcagcgcccg
gccgacgaggcggcgctggtgtcgatctccggcatcggcgcgacgaagctcgaacgcttc
ggcgcggagatcctcggcgtcgtccgggcgtccgcggagtcttga
DBGET
integrated database retrieval system
