KEGG   Amycolatopsis mediterranei U32: AMED_1715
Entry
AMED_1715         CDS       T01269                                 
Name
(GenBank) exonuclease SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
amd  Amycolatopsis mediterranei U32
Brite
KEGG Orthology (KO) [BR:amd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amd03400]
    AMED_1715
DNA repair and recombination proteins [BR:amd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AMED_1715
    Archaeal homologous recombinant proteins
     AMED_1715
SSDB
Motif
Pfam: AAA_23 SMC_N AAA_29 ABC_tran AAA_21 AAA_27 MMR_HSR1 AAA_15 RsgA_GTPase
Other DBs
NCBI-ProteinID: ADJ43526
UniProt: A0A0H3D1Z0
LinkDB
Position
1839869..1842754
AA seq 961 aa
MLLEMTGFASFREKTEVSFEDTDYFALVGPTGAGKSTVIDALTFALYGSVARWDHEGLVA
PALAPTVNRATVRLVFDAGGARYHVVREVRRSGGKKPTVSVKNVRLERLIDPAALGGPED
DADAVAADSEVTPAVERLLGLTFKHFCTCVALPQGDFAEFLHAKAADRQKILIKLLGLEV
YERIGRRAGVTAEQQKQRAAVLTEQLGSYADATEEAVAELAARMTALTELDARVTAALPG
LNDATRAHDEARQRVVALTTELKVLDAVERPDGVEDLETRRRDAADAATAARGALESAET
ADEAARAALAAAPARSELERIRADRTELEATETALPRLEEAAKTALQSKDAAAVAVTEAL
AVVEAARKNRDSTARAAEDTAAEAARARQDRDRLTGLRPPADLGDLSADSARVAKRTAAA
AARLSSAEAADAEARAALAAQPDVAPLAAARSDARTLYAVCEAQRKAAPEQAARRRELET
ARSAFARADAEVTAAKTAVTEAERAGQALSLRAGLAVGHACPVCEQEVTALPDAGGHAHL
AEARERLERAEGERATAEAVVRKLERAADRDADSAASAAAQAEELRAVLAEVAGPPESAV
LLRPVEAAFSEQDYADLVAAVRERGEWLSKTIDGRARVAETASAADQELAAARAERAAAQ
HEADAVEKSFAAAREALRAARDPLVELGAPAIDGDDVPSGWQRLTAWAASALADRRTTLA
ALEAAAEAAGKEAVVAADDLAAAERNAEEWRKRAVDAGLAEQAAATELATARRRRGELAA
ALAGAPSAAVVTEELAKVASLEEAAKRADADLRTARVAAKRATEAQAGIGAQVDAERQRL
SRARDPLVGLGAPPIDGFSGVRVAEPPAQGEAPVVTDGESLLEAWTALTDWAAGQAKAHR
ELLAVAKTAEGEAAEALQAAERAVAGDVTALGVAVPDGPVRDRVPVAVAAARRAPKPTTP
T
NT seq 2886 nt   +upstreamnt  +downstreamnt
gtgctgctggagatgaccggcttcgcgtccttccgcgagaagaccgaagtcagcttcgaa
gacaccgattacttcgcgctcgtcgggccgaccggcgcgggcaagagcacggtcatcgac
gcgctcaccttcgcgttgtacggctctgtggcccgctgggaccacgaaggtctcgtcgcg
cccgcgctggcgccgacggtgaaccgcgccaccgtgcggctggtcttcgacgccggcggc
gcgcgctaccacgtggtgcgggaagtccggcgcagcggcggcaagaaacccacggtcagc
gtcaagaacgtccgcctggaacggctcatcgacccggccgcgctcggcggcccggaggac
gacgccgacgccgtggccgcggactccgaggtcaccccggcggtcgaacgcctgctcggg
ttgacgttcaagcacttctgcacctgcgtggcgctgccccagggcgacttcgcggagttc
ctgcacgcgaaggccgccgaccggcagaagatcctcatcaagctgctgggcctggaggtc
tacgagcgcatcggccgccgggccggggtgacggcggagcagcagaagcagcgcgccgcc
gtcctcaccgaacagctcggcagctacgccgacgccaccgaagaagccgtcgccgagctg
gcggcgaggatgacggcgctcacggagctggacgcgcgggtgaccgcggccctgccgggg
ttgaacgacgccacgcgcgcgcacgacgaagcccggcaacgcgtcgtcgcgctcacgacg
gagctgaaagtcctcgacgctgtagaacgcccggacggcgtcgaagacctcgaaacccgg
cgtcgcgacgcggcggacgcggccacggccgcccggggagcgttggagtcggcggaaacg
gcggacgaagccgcccgcgccgcgctcgccgcggcgcccgcgcgcagtgaactggaacgg
atccgcgccgaccgcaccgagctcgaggcgacggagacggcccttccgcggctcgaagaa
gcggcgaaaacggcgttgcagagcaaggacgcggccgccgtcgcggtcaccgaagccctc
gccgtcgtcgaggcggcccggaagaaccgggactcgacggcccgtgccgcggaggacacc
gccgcggaagccgcgcgggcccgccaggatcgcgaccggctgaccggcctgcgcccgccc
gcggatctcggggacctgtcggcggattcggcgcgggtggcgaagcgcacggcggccgcg
gccgcccgcctgagctcggccgaggccgccgacgccgaagcgcgggcggcgctggccgcg
cagccggacgtcgctccgctcgcggcggcgcgctccgatgcgcgcacgctgtatgcggtg
tgcgaggcgcaacggaaagccgcccccgagcaggccgcgcgccggagggaactcgaaacg
gcgcgaagcgccttcgcccgcgcagacgccgaagtgacggcggcgaagaccgcggtgacc
gaagcggaacgggccgggcaggcgctgagcctgcgggccggcctcgccgtcgggcacgcg
tgcccggtgtgcgagcaggaagtcacggcgctgcccgatgccggcggccacgcccacctg
gccgaggcccgcgaacgcctcgagcgcgccgaaggcgagcgcgccaccgccgaagccgtc
gtgcgcaagctggagcgggccgccgaccgcgacgccgattccgccgcgtcggcggccgcg
caggcggaggaactgcgcgcggtgctggccgaggtggccggcccgccggaatcggccgtg
ctgctgcggccggtcgaggctgctttctccgagcaggactacgcggacctcgttgccgcc
gtgcgcgagcggggcgagtggctgtcgaagacgatcgacggccgcgctcgcgtcgccgag
accgcgagcgccgcggaccaggaactggccgcggctcgcgccgaacgcgcggcggcgcag
cacgaagccgacgccgtcgagaagtcgttcgcggcggccagggaagcgctgcgggccgcg
cgcgaccccctggtggagctgggcgcaccggccatcgacggcgacgacgtcccgtcaggc
tggcagcggctcaccgcgtgggcggcttccgcgctggcggaccggcggacgacgctggcc
gcgctcgaagcggccgccgaagccgcgggcaaagaagccgtcgtcgcggcggacgacctc
gccgccgcggagcggaacgccgaggagtggcggaagcgggccgtcgacgcgggcttggcc
gagcaggcggcggccaccgagctcgccaccgcccggcgccggcgcggtgaactcgccgcg
gcgctcgccggtgcgccgtccgccgccgtcgtcaccgaggagctggcgaaggtcgcttcc
ctggaagaagccgcgaagcgagcggacgcggatctgcgcactgcccgggtggccgcgaaa
cgcgccacggaagcccaggcgggcatcggcgcccaggtcgacgccgagcggcagcggctg
tcccgggcccgagacccgctggtcggcctgggtgccccgccgatcgacggcttttcgggg
gtccgggtggcggagcccccggcccagggcgaagccccggttgtcacagacggcgaaagc
ctcctcgaagcctggaccgcgctcacggattgggccgccggccaggcgaaagcccaccgc
gagctgctggccgtcgcgaagaccgccgaaggtgaagccgccgaagcgttgcaagcggcc
gaacgcgcggtcgccggcgacgtcaccgcgctcggggtcgccgtgccggacgggccggtg
cgcgaccgcgtcccggtcgccgtcgcggccgcgcggcgcgcgccgaagccgaccacaccg
acatga

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