Amycolatopsis mediterranei U32: AMED_1749
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Entry
AMED_1749 CDS
T01269
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AMED_1749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amd03400
]
AMED_1749
Enzymes [BR:
amd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AMED_1749
DNA repair and recombination proteins [BR:
amd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AMED_1749
Prokaryotic type
AMED_1749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
ADJ43560
UniProt:
A0A0H3CZP3
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All DBs
Position
1877142..1877819
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AA seq
225 aa
AA seq
DB search
MTARPLQDIVEAGWAKALEPVAPQVAAMGEFLRAEISAGRTYLPAGEHVLRAFQQPFHDV
RVLIVGQDPYPTPGHAVGLSFSVAPDVRPIPKSLVNIYKEYTEDLGHPLPSNGDLTPWAE
QGVLLLNRALTVQPGKSNSHQGKGWEEVTEQAIKALAARSEPMVAILWGRNARNLRPMLG
EVPCIESAHPSPLSAHNGFFGSRPFSRANQLLEQQGAAPVDWKLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcacgaccgctgcaggacatcgtcgaggcaggctgggcgaaagccctcgaaccg
gtggcgccgcaggtcgccgcgatgggggagttcctccgcgcggagatctccgcgggccgc
acgtacctaccggcgggtgaacacgtgctgcgggcgttccagcagccgttccacgacgtc
cgcgtgctgatcgtcgggcaggacccgtacccgacgccggggcacgcggtgggcctgagc
ttctcggtggcgccggacgtccggccgatcccgaagagcctggtcaacatctacaaggag
tacaccgaggacctcggccacccgctgccgtccaacggtgacttgacgccgtgggccgag
cagggcgtgctgctgctcaacagggcgctgaccgtgcagcccgggaagtccaattcgcac
cagggcaagggctgggaagaggtcaccgagcaggcgatcaaggccctcgcggcccgctcg
gagccgatggtggcgatcctgtggggccgcaacgcccgcaacctgcgcccgatgctcggc
gaggtgccgtgcatcgagtcggcgcacccgagcccgctctcggcgcacaacggcttcttc
gggtcgcgcccgttcagccgggccaaccagctcctggagcagcagggcgcggcgccggtg
gactggaaactgccgtag
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