Amycolatopsis mediterranei U32: AMED_1813
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Entry
AMED_1813 CDS
T01269
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase subunit 1
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00260
Glycine, serine and threonine metabolism
amd00630
Glyoxylate and dicarboxylate metabolism
amd00670
One carbon pool by folate
amd00785
Lipoic acid metabolism
amd01100
Metabolic pathways
amd01110
Biosynthesis of secondary metabolites
amd01200
Carbon metabolism
Module
amd_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AMED_1813 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AMED_1813 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AMED_1813 (gcvP)
00670 One carbon pool by folate
AMED_1813 (gcvP)
Enzymes [BR:
amd01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
AMED_1813 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
ADJ43624
UniProt:
A0A0H3D0A4
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Position
1944466..1947255
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AA seq
929 aa
AA seq
DB search
MLAECGYGSLDALVGAAVPSAIRATRDLRLPPAASEEEATAELRALAARNRPMTQMIGLG
YSDTVTPGVIRRNVLENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLATANASLL
DESTAVAEAVTLMRRASKSKSNKVVLDAECLPQTIAVVRTRVEALGIEVEVRDLLTGLPD
EFFGVVVQYPGASGVLRGRGFYHAISESAKAAGALFTVAADLLALTLITSPGEFGADVAA
GSTQRFGVPLGYGGPHAGYMSVRSGLERSLPGRLVGVSVDADGNSAYRLALQTREQHIRR
EKATSNICTAQVLPAVLAAMYAVYHGPDGLKKIAQRVHGLAAGFAGALRRTGVEVVHESF
FDTVVAHVPGQAAEIHAAAREAGINLGHVDADHVRVAFDEVSTPAIAAKVLRAFGVDEDI
QDGPALPENTALPNGLARESGFMGHEVFGTHRSETAMLRYLRRLADQDYALDRGMIPLGS
CTMKLNATTEMEPISWREFAGIHPFAPAEDAAGYHTLVAQLADWLAEVTGYDKVSLQPNA
GSQGELAGLLAIRAYHRANGDEARDVCLIPSSAHGTNAASAVLAGMRVVVVKCTDEGNVD
LADLRAKVDAHRDTLAAIMVTYPSTHGVYEHDIDELAKIVHDGGGQVYVDGANLNALLGL
AKPGEFGGDVSHLNLHKTFCIPHGGGGPGVGPVAVRAHLAPYLPNHPLLAAAGPETGVGP
ISGAPYGSASILPISWAYVRMMGAPGLTAATEVAVLAANYVASRLAPHYPVLYTGQDGLV
AHECILDLRQITKETGVTVDDVAKRLIDYGFHAPTMSFPVAGTLMVEPTESEDLGEIDRF
CDAMIAIRAEIDEVAQGRWSAEESPLRGAPHTAETLVGEWDKPYSRELAVYPAGVSRKNK
YWPPVRRIDGARGDRNLVCSCPPLNAYEG
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgctggccgagtgcggctacggcagcctggacgccctggtcggcgcggccgtccccagc
gccatccgcgccacccgtgacctgcggctcccgcccgccgcgtccgaagaggaagccacc
gcggagctgcgcgccctcgccgcgcgcaaccggccgatgacgcagatgatcggcctcggc
tactccgacaccgtcacgcccggcgtgatccgccgcaacgtgctggagaacccggcctgg
tacaccgcgtacacgccctaccagccggagatctcccagggccggctcgaagccctcctc
aacttccagaccatggtcgccgacctgaccggcctggccaccgcgaacgcctcgctgctg
gacgagtcgaccgccgtcgccgaagccgtcacgctcatgcgccgcgcgtcgaagtccaag
tcgaacaaggtcgtcctcgacgccgagtgcctgccgcagaccatcgccgtcgtgcgcacc
cgcgtcgaggccctgggcatcgaggtcgaggtccgcgacctgctcaccggcctgccggac
gagttcttcggggtcgtcgtccagtacccgggcgcgtccggcgtgctgcgcggccgcggc
ttctaccacgcgatttccgagtcggcgaaggccgcgggcgcgctgttcaccgtcgccgcc
gacctcctcgcgctcaccctgatcacctcgcccggcgagttcggcgcggacgtcgccgcc
gggtcgacccagcgcttcggcgtcccgctcggctacggcggcccgcacgccgggtacatg
tcggtccgctccggcctcgagcggtcgctgcccgggcgtctcgtcggcgtctcggtcgac
gccgacggcaactccgcctaccggctcgcgctgcagacgcgtgagcagcacatccgtcgc
gagaaggcgacgtccaacatctgcaccgcgcaggtcctgcccgccgtgctggccgcgatg
tacgcggtctaccacggtccggacggcctgaagaagatcgcccagcgcgtccacggcctc
gccgcgggcttcgccggcgccctgcgccggaccggcgtcgaggtcgtgcacgagtcgttc
ttcgacaccgtcgtggcgcacgtccccggccaggccgccgagatccacgcggcggctcgc
gaggccgggatcaacctcgggcacgtcgacgccgaccacgtccgggtcgccttcgacgag
gtcagcacccccgccatcgccgcgaaggtcctgcgcgcgttcggggtcgacgaagacatc
caagacggccccgccctgccggaaaacactgcgctgcccaacggcctggcccgcgagagc
ggcttcatgggccacgaggtcttcggcacccaccgctccgagacggcgatgctgcgctac
ctgcgtcgcctggccgaccaggattacgcgctcgaccgcggcatgatcccgctcggctcc
tgcacgatgaagctcaacgccaccaccgagatggagccgatcagctggcgcgagttcgcg
ggcatccacccgttcgcgccggccgaggacgctgccgggtaccacacgctggtggcgcag
ctggccgactggctggccgaggtcaccggctacgacaaggtgtcgctgcagccgaacgcg
ggcagccagggcgagctggccggccttctcgcgatccgcgcctaccaccgcgcgaacggc
gacgaagcccgtgacgtctgcctgatcccgtcgtcggcgcacggcaccaacgccgcgtcc
gcggtgctcgccgggatgcgcgtggtcgtcgtcaagtgcaccgacgagggcaacgtcgac
ctcgccgacctgcgggccaaggtggacgcccaccgggacacgctcgccgcgatcatggtg
acgtacccgtccacgcacggcgtgtacgagcacgacatcgacgagctggccaagatcgtc
cacgacggcggcggccaggtgtacgtcgacggcgcgaacctcaacgccctgctcgggctg
gccaagccgggcgagttcggcggcgacgtctcgcacctgaacctgcacaagacgttctgc
atcccgcacggcggcggtggccccggcgtcggcccggtcgcggtgcgcgcgcacctcgcg
ccctacctgccgaaccacccgctgctggcggccgccggcccggaaaccggggtcggcccg
atcagcggcgccccctacggctcggcgtcgatcctgccgatttcctgggcctacgtccgg
atgatgggcgcgcccggcctgaccgcggccaccgaggtcgccgtgctggccgcgaactac
gtcgcttcgcgcctggcgccgcactacccggtgctctacacgggccaggacggcctggtc
gcccacgagtgcatcctcgacctgcgccagatcaccaaggagaccggcgtgacggtcgac
gacgtcgccaagcggctcatcgactacggcttccacgcgccgacgatgtcgttcccggtc
gcgggcacgctgatggtcgagccgaccgagtccgaggacctgggcgagatcgaccggttc
tgcgacgcgatgatcgccatccgcgccgagatcgacgaggtcgcgcagggtcgctggagc
gcggaggagtcgccgctgcgcggagccccgcacaccgcggagacgctggtcggggaatgg
gacaagccgtacagccgcgagctggccgtgtacccggcgggtgtttcgcgcaagaacaag
tactggcccccggtgcgtcgcatcgacggcgcccgcggtgaccgtaacctcgtgtgctcc
tgcccgcccctcaacgcttacgaaggctga
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