Amycolatopsis mediterranei U32: AMED_1903
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Entry
AMED_1903 CDS
T01269
Symbol
smc
Name
(GenBank) chromosome segregation ATPase
KO
K03529
chromosome segregation protein
Organism
amd
Amycolatopsis mediterranei U32
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amd03036
]
AMED_1903 (smc)
Chromosome and associated proteins [BR:
amd03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
AMED_1903 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
BLOC1_2
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ADJ43712
UniProt:
A0A0H3CYI4
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Position
2040744..2044346
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AA seq
1200 aa
AA seq
DB search
MHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVLDALRWVMGTQGAKDLRGGK
MEDVIFAGTAGRAPLGRAEVTLTIDNADGALPIEYSEVSITRRMFRDGASEYEINGDRCR
LMDVQELLSDSGIGREMHVIVGQGQLSAILESKPEERRAFIEEAAGVLKHRKRKEQTLRK
LANMQGNLDRLGDLTTELRRQLKPLGKQAEIARKAQSVQSELRDSRLRLLADDLVTQRTA
IAREEADEKSARQRRAEVEQHLEIVSAEETELEASLAEDAPLLQAAQETWYKLSALAERL
RGTVRLAIERQRHLSADVSTSTGGRDPEELLEEAERVAEQEEELNEAVMEARELLAQTIL
RREDLEQRVQAAERAHWAAVRAIADRREGMAKLTGQVEALRSKNGATSDEIDRLSVSLEE
AAERAEIAVEELEMAKAEGGVEESDDAGLMDRHDRAVEANNAAKARVEELVKAERAAERE
IASEKARVEALSMGLRRKDGAGALLGASHELPGLLGSVAALLTVEPGYEVALAAALGPVA
DAVAVTGGEDALRALKYLKETDSGRAGILLGGLESTVDTYSWPSLPEGARWAREVVTAPP
QLRPAVEQALDKLALVRDLDAARHLVAVHPDVRAVTAEGDVFGARWAIGGSGKRESVIEV
QAAVDEAGERLRLAERSLERYAAELEGARAEQQARREEVSQAKDALGEAKVRKARSSERL
NRMQQAARQAQAEVERLSGQRAKVEQSRVQALAQLAELEERLAAVAEQPVEDDPDTAERD
QAVEELAVVRQEEMEARLAQRTSEERARSIAGKAEGLRRAAHAEQQARERAERAAAARKR
GAGIANAVVDAGELALERIEHSVQRAATERDQVQARRQSREQALTGVRAKVRELTGELEK
LTDAVHRDEVLRAEQRLRLETLEAKIAEDFGMGLEDLVREYGPDVPVPPSAGEMAEYEAA
KDRGEDVTPPPPMPYDRDTQTRRARRAEKDLSLLGKVNPLALEEFAALEERYKFLSTQLE
DLKDTRKDLEAVIKQVDEKILEVFAGAYADVAREFETVFSVLFPGGEGRMVLTEPDDLLA
TGVDVEARPPGKKVKRLSLLSGGEKSLVAVGMLVAIFRARPSPFYVMDEVEAALDDTNMR
RLIGLLEQLRDSSQLIIITHQKPTMEIADALYGVSMQGDGITKVISQRLRTADDEPVAVG
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
gtgcacctgaaaagcctgacgctcaagggcttcaagtccttcgcctcggccaccacgctg
cgcttcgagccgggcatcacctgcgtggtcgggccgaacggctccggcaagtccaacgtg
ctggacgcgctgcgctgggtcatgggcacccagggcgccaaggacctgcgcggcggcaag
atggaggacgtcatcttcgccggcaccgcgggccgcgccccgctcggccgcgccgaggtc
accctcaccatcgacaacgccgacggcgcgctcccgatcgagtactccgaggtgtcgatc
acccgccggatgttccgcgacggcgcgagcgagtacgagatcaacggcgaccgctgccgc
ctgatggacgtccaggaactgctgtcggactccggcatcggccgcgagatgcacgtcatc
gtcggccagggccagctctcggcgatcctcgagtccaagcccgaagagcgccgcgccttc
atcgaagaggccgccggcgtcctcaagcaccgcaagcgcaaggaacagaccctgcgcaag
ctggccaacatgcagggcaacctcgaccgcctcggcgacttgacgaccgagctgcgccgc
cagctcaagccgctgggcaagcaggccgagatcgcccgcaaggcccagtcggtccagtcc
gagctgcgcgactcccgcctgcgcctgctcgccgacgacctggtcacccagcgcaccgcc
atcgcccgcgaagaggccgacgagaagtccgcccgccagcgccgcgccgaggtcgagcag
cacctcgagatcgtctcggccgaggaaaccgagctggaagcctcgctcgccgaggacgcg
ccgctgctgcaggccgcccaggaaacctggtacaagctgtcggcgctggccgagcgcctc
cgcggcaccgtccggctggcgatcgagcgccagcggcacctgtcggccgacgtctcgacg
tcgaccggcggccgcgaccccgaagagctcctcgaagaggccgagcgcgtcgccgagcag
gaggaagagctcaacgaggccgtcatggaggcccgcgagctgctcgcccagacgattctg
cgccgcgaagacctcgaacagcgcgtccaggccgccgagcgcgcgcactgggccgccgtc
cgcgccatcgccgaccgccgcgaaggcatggccaagctcaccggccaggtcgaggcgctg
cgcagcaagaacggcgccacctccgacgagatcgaccgcctcagcgtctccctcgaagag
gccgccgagcgcgccgagatcgccgtcgaagaactcgagatggcgaaggccgagggtggc
gtcgaggagtccgacgacgccggcctgatggatcgccacgaccgcgcggtcgaggccaac
aacgcggccaaggcgcgtgtcgaagagctggtcaaggccgagcgcgcggccgagcgggaa
atcgcgtcggagaaggcgcgcgtcgaggcgctgtcgatgggcctgcggcgcaaggacggc
gcgggtgcgctgctcggcgcgtcccacgaactgccgggcctgctcggctcggtcgccgcg
ttgctcaccgtcgagcccggctacgaggtcgcgctggccgcggcgctcggcccggtggcc
gacgccgtcgccgtgaccggcggcgaagacgccctgcgtgcgctgaagtacctgaaggaa
acggactccggccgcgcgggcatcctgctcggcggcctcgaatccaccgtggacacctat
tcgtggccgtcgctgccggaaggcgcgcgctgggcccgcgaggtcgtcaccgcgccgccg
cagctgcggcccgccgtcgagcaggccctcgacaagctggctctggtccgcgacctcgac
gccgcccgccacctggtggcggtgcacccggacgtccgcgcggtcaccgccgagggtgac
gtcttcggtgcccgctgggcgatcggcggctccggcaagcgcgagagcgtgatcgaggtc
caggccgccgtcgacgaggcgggggagcggctccggctggccgagcgctcgctggagcgg
tacgcggccgagctggaaggcgcccgcgccgagcagcaggcgcgtcgcgaagaggtttcc
caggccaaggacgccctcggcgaggcgaaggtccgcaaggcgcgctcgtcggagcggctc
aaccggatgcagcaggccgcccgccaggcgcaggccgaggtcgagcggctgtccggccag
cgcgcgaaggtcgagcagagccgcgtccaggccctcgcccagctcgccgagctggaggag
cggctcgccgccgtcgccgagcagcccgtcgaagacgacccggacaccgccgaacgcgat
caggccgtcgaagagctggccgtcgtgcggcaggaggagatggaagcgcggctcgcgcag
cgcacctccgaagagcgcgcccgcagcatcgcgggcaaggccgaaggcctccgccgggcc
gcgcacgccgagcagcaggcccgcgagcgcgccgagcgcgccgccgcggcccgcaagcgc
ggcgccgggatcgccaacgccgtcgtcgacgccggcgagctcgcgctggagcgcatcgag
cactcggtgcagcgcgcggcgaccgaacgcgaccaggtccaggcccgccgccagagccgc
gagcaggcgctgaccggcgtccgcgccaaggtccgcgaactcaccggcgaactggagaag
ctgaccgacgccgtgcaccgcgacgaggtgctgcgcgccgagcagcggctgcggctggag
accctggaagccaagatcgccgaggacttcggcatgggcctcgaggacctcgtccgcgag
tacggcccggacgtcccggtgccgccgagcgcgggcgagatggccgagtacgaggcggcc
aaggatcgcggcgaggacgtcaccccgccgccgccgatgccctacgaccgcgacacccag
acccgccgcgccaggcgcgccgagaaggacctgtcgttgctgggcaaggtgaacccgctc
gcgctcgaggagttcgcggcgctggaggagcggtacaagttcctctccacgcagctggaa
gacctcaaggacacccgcaaggacctcgaagccgtcatcaagcaggtcgacgaaaagatc
ctcgaggtcttcgccggcgcctacgccgacgtggcccgcgagttcgagaccgtgttcagc
gtgctcttcccgggcggcgagggccggatggtcctcaccgagccggacgacctgctggcc
accggcgtcgacgtcgaagcgcgtccgccgggcaagaaggtcaagcggctgtcgctgctg
tccggtggcgagaagtcgctggtcgcggtgggcatgctggtcgcgatcttccgcgcccgg
ccgtcacccttctacgtcatggacgaggtcgaggcggcgctcgacgacaccaacatgcgc
cggctgatcgggctgctggagcagctgcgcgactcgtcgcagctgatcatcatcacccac
cagaagccgacgatggagatcgccgacgctctctacggcgtgagcatgcagggcgacggc
atcaccaaggtgatctcgcagcgcctgcgcacggccgacgacgaaccggtcgcggtcggc
tag
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