KEGG   Amycolatopsis mediterranei U32: AMED_1965
Entry
AMED_1965         CDS       T01269                                 
Symbol
rnhB
Name
(GenBank) ribonuclease HII
  KO
K03470  ribonuclease HII [EC:3.1.26.4]
Organism
amd  Amycolatopsis mediterranei U32
Pathway
amd03030  DNA replication
Brite
KEGG Orthology (KO) [BR:amd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AMED_1965 (rnhB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amd03032]
    AMED_1965 (rnhB)
Enzymes [BR:amd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     AMED_1965 (rnhB)
DNA replication proteins [BR:amd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    RNase H
     AMED_1965 (rnhB)
   Elongation factors (archaeal)
     AMED_1965 (rnhB)
SSDB
Motif
Pfam: RNase_HII LysX_preATP_grasp
Other DBs
NCBI-ProteinID: ADJ43773
UniProt: A0A0H3CZL2
LinkDB
Position
2102840..2103682
AA seq 280 aa
MVRGDLFWGLQGALDRRGLGPVAGVDEAGAGACAGPLVVAACVLKQGDAAKLIELTDSKM
MTAKARDRVYDLVLARAVDYSVIVIPTEEVDLYGIRVMNLEGMRRAAAALRVQPGYVLTD
GFRVPGLTAPNTAVIKGDRSVACIAAASVLAKVTRDRIMAGYHDDFPHYGFDVHKGYSTS
DHLAALREHGPSDVHRWSYTNVATVAVKHGLRPARPVLLTYAALEKAMETPGAAGLAAVL
DEALEPQLSLPLHAPAAGVGHNERSAGGAAARSRGGARIS
NT seq 843 nt   +upstreamnt  +downstreamnt
gtggtgcgcggcgacctcttctggggtctgcagggtgcactcgaccgccgtggcctcggc
ccggtcgccggcgtggacgaagccggcgccggggcgtgcgcggggccgctggtggtcgcg
gcctgcgtgctgaagcagggcgacgcggcgaagctgatcgagctgacggattcgaagatg
atgacggccaaggcgcgggaccgggtctacgacctggtcctcgcccgggcggtcgactac
tcggtgatcgtcatcccgaccgaagaggtcgacctctacggcatccgggtgatgaacctg
gagggtatgcgccgcgccgcggcggccctgcgcgtgcagccgggttacgtcctcaccgac
gggttccgcgtcccgggtctgacggctccgaacacggcggtcatcaagggcgaccggtcg
gtggcctgcatcgcggccgcgtccgtgctggcgaaggtgacgcgagaccgcatcatggcg
ggctaccacgacgacttcccgcactacgggttcgacgtgcacaaggggtacagcacatcc
gaccacctggcggcgctgcgggagcacgggcccagcgacgtccaccgctggtcgtacacg
aacgtggccacggtggccgtcaagcacggcctgcgcccggcgcggccggtcctgctgacg
tacgcggcgctggaaaaagccatggagacgcccggcgcggccggcctggccgcggtcctc
gacgaggcattagagccacaactcagcctgccgctgcatgccccggccgcgggtgtgggt
cacaatgaacgctccgccggcggagcagcagcacgatcccgaggaggggcgcggatttca
tga

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