Amycolatopsis mediterranei U32: AMED_2266
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Entry
AMED_2266 CDS
T01269
Symbol
gcdH
Name
(GenBank) glutaryl-CoA dehydrogenase
KO
K00252
glutaryl-CoA dehydrogenase [EC:
1.3.8.6
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00071
Fatty acid degradation
amd00310
Lysine degradation
amd00362
Benzoate degradation
amd00380
Tryptophan metabolism
amd01100
Metabolic pathways
amd01110
Biosynthesis of secondary metabolites
amd01120
Microbial metabolism in diverse environments
Module
amd_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
AMED_2266 (gcdH)
09105 Amino acid metabolism
00310 Lysine degradation
AMED_2266 (gcdH)
00380 Tryptophan metabolism
AMED_2266 (gcdH)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AMED_2266 (gcdH)
Enzymes [BR:
amd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.6 glutaryl-CoA dehydrogenase (ETF)
AMED_2266 (gcdH)
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Motif
Pfam:
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
ACOX_C_alpha1
Acyl-CoA_ox_N
Motif
Other DBs
NCBI-ProteinID:
ADJ44064
UniProt:
A0A0H3D1I6
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Position
complement(2420090..2421262)
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AA seq
390 aa
AA seq
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MNRTPDPHDFLDLDAGLAEEERAIRDAVRAYAKDHLLDHVADWYETGALPAAELAKGFGS
LGLLGMHLEGYGCAGTSAVAYGIACRELEAVDSGLRSFVSVQGSLAMYAIHRWGSEEQRQ
EWLPRMATGEALGCFGLTEPDAGSDPGSMRTRAVRDGSDWVLSGTKMWITNGTVADVAVV
WAQTDDGIRGFVVPTSTPGFTANEVKHKLSLRASLTAELVLDGVRLPSSAAFPEVRGLRG
PLSCLNEARYGILFGVVGAARACYEAALEYTLSRSQFGKPLAGFQLTQRKLADLLVEVNR
AGLVALQIGRLKDAGALHHNHVSFGKMANVRSALDAARTARSMLGANGISLEYPVMRHMA
NLETVLTYEGTEEMHALSLGQAVTGLAAFR
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcacccctgacccgcacgattttctcgacctcgacgccgggctcgccgaggag
gaacgcgccatccgcgacgccgtccgcgcgtacgcgaaggaccacctgctggaccacgtc
gccgattggtacgaaacgggcgcgctccccgcggcggagctggcgaagggcttcggctcg
ctcggcctgctcggcatgcacctggagggctacggctgcgccggcaccagcgccgtcgcg
tacggcatcgcttgccgcgagctggaggccgtcgactcgggcctgcgcagcttcgtctcg
gtgcagggatcgctggcgatgtacgcgatccaccggtggggcagcgaagagcagcggcag
gagtggctgccgcggatggccaccggcgaggcgctgggctgtttcggcctgaccgagccg
gacgcgggcagcgaccccggttcgatgcggacccgcgcggtgcgcgacggctccgactgg
gtgctctcgggcacgaagatgtggatcaccaacgggaccgtcgccgacgtcgcggtcgtc
tgggcgcagaccgacgacgggatccgcggtttcgtcgtcccgacgtcgacgccgggcttc
acggccaacgaggtcaagcacaagctgtcgctgcgggcgtccctgacggcggaactggtg
ctcgacggcgtccggttgccgtcatcggcggcgtttcccgaggtccgcgggctgcgcggg
ccgctgtcctgcctgaacgaagcccgctacgggatcctgttcggggtcgtcggcgcggcg
cgcgcgtgctacgaagccgcgttggagtacacgctctcgcgttcgcagttcgggaaaccg
ctcgccgggttccagctgacccagcgcaagctcgccgacctgctcgtcgaggtcaaccgc
gccgggctggtggccctgcagatcgggcgactgaaggacgccggtgccctgcaccacaac
cacgtcagcttcgggaagatggcgaacgtccggtcggcgctggacgcggcccggaccgcg
cgctcgatgctcggcgccaacgggatttcgctggagtacccggtgatgcggcacatggcg
aacctcgagacggtgctgacgtacgaaggcaccgaagagatgcacgcgctgtccctcggc
caggcggtcaccgggctggccgcgttccgctga
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