Amycolatopsis mediterranei U32: AMED_2353
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Entry
AMED_2353 CDS
T01269
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur protein
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00020
Citrate cycle (TCA cycle)
amd00190
Oxidative phosphorylation
amd00650
Butanoate metabolism
amd00720
Other carbon fixation pathways
amd01100
Metabolic pathways
amd01110
Biosynthesis of secondary metabolites
amd01120
Microbial metabolism in diverse environments
amd01200
Carbon metabolism
Module
amd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
amd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
amd_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AMED_2353 (sdhB)
00650 Butanoate metabolism
AMED_2353 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
AMED_2353 (sdhB)
00720 Other carbon fixation pathways
AMED_2353 (sdhB)
Enzymes [BR:
amd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
AMED_2353 (sdhB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_17
Fer4_7
Fer2
Fer4_18
Fer4_10
Fer4_9
Motif
Other DBs
NCBI-ProteinID:
ADJ44150
UniProt:
A0A0H3D0K7
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All DBs
Position
2512084..2512836
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AA seq
250 aa
AA seq
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MSYKASFRVWRGDDTGGELQDFTVEVNEGEVVLDIIHRLQATQASDLAVRWNCKAGKCGS
CSAEINGKPRLLCMTRMSTFTEEEVITVTPMRTFPVIRDLVTDVSFNYTKAREIPSFTPP
ADLKPGEYRMQQVDVERSQEFRKCIECFLCQNTCHVVRDHEENKEAFAGPRYLMRIAELE
MHPLDVADRRDAAQDEHGLGYCNITKCCSEVCPEGIHITDNALIPMKERVADRKYDPIVW
LGNKLFRRDK
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgagctacaaggcgagtttccgcgtgtggcgtggcgacgacaccggcggcgagctgcag
gacttcaccgtggaggtgaacgagggcgaggtggtcctcgacatcatccaccggctgcag
gccacccaggcgtcggacctcgcggtgcgctggaactgcaaggcgggcaagtgcggctcg
tgctcggcggagatcaacggcaagccgcgcctgctgtgcatgacgcggatgtcgacgttc
accgaggaagaggtgatcacggtgacgccgatgcggacgttcccggtgatccgcgacctc
gtcaccgacgtgtcgttcaactacacgaaggcgcgcgagatcccgtcgttcaccccgccc
gcggacctgaagccgggcgagtaccggatgcagcaggtggacgtcgagcggtcgcaggag
ttccgcaagtgcatcgagtgcttcctgtgccagaacacctgccacgtggtgcgtgaccac
gaggagaacaaggaagccttcgccgggccgcggtacctgatgcgcatcgccgagctggag
atgcacccgctggacgtcgcggaccgccgtgacgcggcccaggacgagcacggcctcggg
tactgcaacatcacgaagtgctgttcggaggtgtgcccggaggggatccacatcacggac
aacgcgctgatcccgatgaaggagcgcgtcgcggaccgcaagtacgacccgatcgtgtgg
ctgggcaacaagctcttccgccgggacaagtag
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