Amycolatopsis mediterranei U32: AMED_2475
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Entry
AMED_2475 CDS
T01269
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP+)
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00250
Alanine, aspartate and glutamate metabolism
amd00310
Lysine degradation
amd00350
Tyrosine metabolism
amd00650
Butanoate metabolism
amd00760
Nicotinate and nicotinamide metabolism
amd01100
Metabolic pathways
amd01120
Microbial metabolism in diverse environments
Module
amd_M00027
GABA (gamma-Aminobutyrate) shunt
amd_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
AMED_2475 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AMED_2475 (gabD)
00310 Lysine degradation
AMED_2475 (gabD)
00350 Tyrosine metabolism
AMED_2475 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
AMED_2475 (gabD)
Enzymes [BR:
amd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
AMED_2475 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
AMED_2475 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
AMED_2475 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
ADJ44271
UniProt:
A0A0H3D266
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Position
complement(2637111..2638721)
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AA seq
536 aa
AA seq
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MTSTTPANAVEDPSLPPTVGGVAGAPGSARAARLVARVTGGADSAPIRMRAPFTGLPIAT
LPQATDADVRAVFADARTAQTAWADRSPAERARVLTRLHDLVLARQDEVLDLVQVEAGKA
RLDAFDEVSATALVAAYYGKHAAKLLAPRRVAGVIPGLTRAGEVRHPKGVVGIISPWNYP
LALTAMDVLPALAAGNAVVQKPDNQTALSALWLHELAEEAGLPAGTWQIVLGRGSKIGTA
LVEESDYLCFTGSTPTGKELAGQVAKRLTSYSLELGGKNPMVVLPDADVAKAATGAVTAC
FSSAGQLCVSVERIYVHEDIREEFTRAFVARTAALRLGGALDYHAQMGSLTSEDQLATVS
AHVEDARAKGASVLTGGRARPDLGPLFYEPTVLSGVTPDMLPFAEETFGPVVSIYGYTDV
TDAIERANDTPFGLNASVWSRNGRAGWEVAARLKAGTVNVNEGYAATFGSVGVPMGGMKD
SGVGRRNGAEGLLKYTESQSIALQRGLALRPPRAIPGSLWSRGMTFGLKALRRLPR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcacgacccccgcgaacgcggtcgaagacccctcgctgccgcccaccgtcggc
ggcgtcgccggggcgccgggctcggcgcgggcggcccggctcgtcgcccgcgtgacgggc
ggcgcggactccgcgccgatccggatgcgggcgcccttcaccgggttgccgatcgcgacg
ctgccgcaggccaccgacgccgacgtccgggcggtgttcgcggacgcgcgcacggcccag
acggcgtgggccgaccgctcccccgccgagcgcgcccgcgtcctcacccgcctgcacgac
ctcgtgctcgcccggcaggacgaggtactggacctggtccaggtcgaggccggcaaggcg
cggctcgacgcgttcgacgaggtcagcgcgaccgcgctggtggcggcctactacggcaag
cacgcggcgaagctcctcgcgccccgccgggtcgccggcgtcatccccggcctgacccgc
gcgggcgaggtccgtcaccccaagggcgtcgtcgggatcatctcgccgtggaactacccc
ctggctctgaccgcgatggacgtcctgccggcgctggccgcggggaacgccgtcgtgcag
aagccggacaaccagaccgcgctttcggcgctgtggctgcacgagctcgccgaggaggcc
gggctgcccgccgggacctggcagatcgtgctcggccgcggctcgaagatcggcaccgcg
ctggtcgaggagtcggactacctctgcttcaccggctccacaccgaccggcaaggagctg
gcgggccaggtggcgaagcggctgacgtcgtactcgctggaactcggcggcaagaacccg
atggtcgtgctgcccgacgccgacgtcgcgaaggccgcgacgggcgcggtgacggcgtgt
ttctcctcggccgggcagctgtgcgtgtcggtcgagcggatctacgtccacgaggacatc
cgcgaggagttcacccgtgcgttcgtcgcgcgcacggcggctttgcggctcggcggcgcg
ctggactaccacgcccagatgggctcgctgacgtcggaagaccagctcgcgacggtgtcg
gcgcacgtcgaggacgcccgcgcgaagggcgcttcggtgttgaccggcggccgcgcgcgg
cccgacctcgggccgctgttctacgagccgacggtgctctccggcgtcaccccggacatg
ctgccgttcgcggaggagacgttcgggccggtcgtctcgatctacggctacaccgacgtc
accgacgccatcgagcgggccaacgacacgccgttcgggctcaacgccagcgtctggtcc
cgcaacggccgcgcgggctgggaggtcgcggcgcggctgaaggccgggacggtcaacgtg
aacgagggctacgcggcgacgttcggcagcgtcggcgtcccgatgggcgggatgaaggac
tcgggcgtcggccgccgcaacggcgccgaaggcctgctgaagtacacggagtcccagtcg
atcgcgctccagcgcggcctggccctccgcccgccgcgcgcgatcccgggctcactgtgg
tcccgaggcatgacgttcggcctcaaagccctccgccgcctcccgcgctga
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