Amycolatopsis mediterranei U32: AMED_2568
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Entry
AMED_2568 CDS
T01269
Symbol
rpoS
Name
(GenBank) RNA polymerase primary-like sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
amd
Amycolatopsis mediterranei U32
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amd03021
]
AMED_2568 (rpoS)
Transcription machinery [BR:
amd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMED_2568 (rpoS)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ADJ44363
UniProt:
A0A0H3D4F2
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All DBs
Position
complement(2735643..2736674)
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AA seq
343 aa
AA seq
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MSVQTLERESRGIRERIPAQTTEEPSMSLGALTDADLDAQSPAADLVRVYLNGIGKTALL
SAADEVELAKRIEAGVFAQHMLDTGENLTTKRRTELAALVRDGHVAKNHLLEANLRLVVS
LAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYSKGFKFSTYATWWIRQAITRGMADQGRT
IRLPVHLVEQVNKLARIKRDLHQQLGRDATHEELAAESGIPAHKISDLLDHSRDPVSLDM
PVGTEEDAPLGDFIEDSEATDAESAVISGLLQDDLRRVLATLDDREQHVIRLRYGLDDGQ
PRTLDQIGKHFGLSRERVRQIEREVMSKLRQGERADRLRAYAS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtccagactctcgaacgcgagtcgcgcgggattcgcgagcgtatcccggctcag
acgaccgaggagccgtcgatgagcctgggggcgctcaccgacgccgacctcgacgcccag
agccccgccgccgacctcgtgcgtgtctacctcaacggtatcggcaagacggccctgctg
tccgcggccgacgaggtcgagctggccaagcgcatcgaagccggcgtgttcgcccagcac
atgctggacaccggggagaacctcaccaccaagcgccgcaccgagctggccgcgctggtc
cgcgacggccacgtggccaagaaccacctgctggaggccaacctccgcctcgtggtctcg
ctcgccaagcgctacaccggccggggcatgccgctgctggacctgatccaggaggggaac
ctgggtctgatccgcgcggtggagaagttcgactactccaaggggttcaagttctcgacc
tacgccacctggtggatccggcaggccatcacccggggcatggccgaccagggccgcacc
atccggctgcctgtccacctggtggaacaggtcaacaagctggcccgcatcaagcgcgac
ctgcaccagcagctcggccgcgacgcgacgcacgaggagctggcggccgagtcgggcatc
ccggcgcacaagatctcggacctgctcgaccactcgcgtgacccggtaagcctggacatg
ccggtcggcaccgaggaggacgccccgctgggcgacttcatcgaggactccgaggccacc
gacgccgagagcgccgtgatctcgggcctgctgcaggacgacctgcgccgtgtcctggcg
acgctggacgaccgcgagcagcacgtgatccgcctgcgctacggcctcgacgacggccag
ccgcgcacgctcgaccagatcggcaagcacttcgggctgtcccgcgagcgcgtccgccag
atcgagcgcgaggtcatgtcgaagctgcgccagggcgagcgcgcggaccggctccgcgcc
tacgcgagctga
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