Amycolatopsis mediterranei U32: AMED_2582
Help
Entry
AMED_2582 CDS
T01269
Symbol
xylF
Name
(GenBank) periplasmic substrate-binding component of ABC-type xylose transport system
KO
K10543
D-xylose transport system substrate-binding protein
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AMED_2582 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amd02000
]
AMED_2582 (xylF)
Transporters [BR:
amd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
AMED_2582 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ADJ44377
UniProt:
A0A0H3D280
LinkDB
All DBs
Position
2752238..2753377
Genome browser
AA seq
379 aa
AA seq
DB search
MRSRTLTLLAATVSAGLALTACGTNSSNSGGTGSNSASSSAPAAGGGANGKVGVILPETA
SSARWEAFDKPMLQAALAAQGFDADVQNAQGDAQKFTTLADGFISSGVKALIIAPSDPAV
GAAVESKAKAAGIPVIDYDRPSLGGSAEYYVSFDNEKVGQLQGQAMADALKDKAGAGVVQ
IEGAPTDNNATLFTKGQDSVLEPLFSAGTLKRIQKQPINDWDNQLGGTTFEQIFTANGGK
VDGVVAANDGLAGAVITILKKNGLNGKVPVTGQDATADGLMAVMRGDQYMTVFKPIKEEA
EATAKLAAALAKGDKAGADAIAKGTLHDPKGNRDIKSVLLTPTTILAKDIKTVVTQGYVK
AAEICGGDLAAKCTSLGIS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcagaacccttaccctcctcgccgcgacggtgagcgccggcctggcgctgacc
gcctgtggcaccaacagttcgaacagcgggggcacggggagcaactccgcttcctcgtcc
gccccggccgccggtggtggcgccaacggcaaggtcggcgtcatcctgccggagaccgcc
agctcggctcgctgggaggccttcgacaagccgatgctgcaggccgccctcgcggcgcag
ggcttcgacgccgacgtccagaacgcccagggcgacgcccagaagttcaccacgctggcc
gacggcttcatcagctccggcgtcaaggccctgatcatcgccccgtccgacccggccgtc
ggtgccgcggtcgagtccaaggcgaaggccgcgggcatcccggtcatcgactacgaccgc
ccgagcctcggcggcagcgccgagtactacgtctcgttcgacaacgagaaggtcggccag
ctccagggtcaggccatggccgacgcgctgaaggacaaggccggagcgggtgtcgtccag
atcgagggcgccccgaccgacaacaacgccacgctgttcaccaagggccaggactcggtc
ctcgagccgctgttctcggcgggcacgctgaagcggatccagaagcagccgatcaacgac
tgggacaaccagctcggcggcacgacgttcgagcagatcttcaccgccaacggcggcaag
gtcgacggcgtcgtcgcggcgaacgacggcctggccggcgcggtcatcaccatcctcaag
aagaacggcctcaacggcaaggtcccggtcaccggccaggacgccaccgccgacggcctg
atggcggtcatgcgcggcgaccagtacatgaccgtgttcaagccgatcaaggaagaggcc
gaggcgaccgcgaagctggccgccgcgctggccaagggcgacaaggccggcgccgacgcc
atcgccaagggcacgctgcacgacccgaagggcaaccgcgacatcaagtcggtgctgctc
acgccgacgacgatcctggcgaaggacatcaagaccgtcgtgacccagggctacgtgaag
gcggccgagatctgcggtggcgacctcgccgccaagtgcacctcgctcggcatctcctga
DBGET
integrated database retrieval system
