Amycolatopsis mediterranei U32: AMED_3221
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Entry
AMED_3221 CDS
T01269
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur protein
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00020
Citrate cycle (TCA cycle)
amd00190
Oxidative phosphorylation
amd00650
Butanoate metabolism
amd00720
Other carbon fixation pathways
amd01100
Metabolic pathways
amd01110
Biosynthesis of secondary metabolites
amd01120
Microbial metabolism in diverse environments
amd01200
Carbon metabolism
Module
amd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
amd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
amd_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AMED_3221 (sdhB)
00650 Butanoate metabolism
AMED_3221 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
AMED_3221 (sdhB)
00720 Other carbon fixation pathways
AMED_3221 (sdhB)
Enzymes [BR:
amd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
AMED_3221 (sdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_7
Fer4_8
Fer4_10
Fer4_9
Fer4
Fer4_17
Fer4_6
Fer4_2
Fer4_18
Fer4_21
Fer4_4
Fer2
Fer4_15
Fer4_3
Fer4_13
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
ADJ45011
UniProt:
A0A0H3D454
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All DBs
Position
3477554..3478300
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AA seq
248 aa
AA seq
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MKLTVRVWRQAGPAAEGRLVAYPVDGISPDMSFLEMLDVLNQRLIEAGDEPVAFDHDCRE
GICGSCGVVINGQAHGPERTTACQLHLRSFADGDVIDVEPWRAKGFPVVKDLVVDRSALD
RIVQAGGYVSAPTGSAPDAHATPVPKPDADLAFDNATCIGCGACVAACPNGSATLFTAAK
VTHLSLLPQGAPERASRVLDMVDAMDAEGFGGCTNTGECVASCPKGIPFTSIATLNREYL
AATRSGRR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactcaccgtccgcgtctggcggcaggccgggccggccgccgagggccggctggtc
gcctacccggtcgacggcatcagcccggacatgtcgttcctggagatgctggacgtgctg
aaccagcggctgatcgaagccggcgacgaaccggtggcgttcgaccacgactgccgcgag
ggcatctgcggttcgtgcggcgtggtgatcaacgggcaggcacacggtcccgagcgcacg
acggcgtgccagctgcacctgcgctccttcgccgacggcgacgtcatcgacgtggaaccg
tggcgagccaagggcttcccggtcgtcaaggacctggtcgtcgaccgctcggcactcgac
cggatcgtccaggccggcgggtacgtcagcgcaccgacgggcagtgcgccggacgcccac
gccaccccggtccccaagccggacgcggacctggccttcgacaacgcgacctgcatcggc
tgcggcgcctgcgtggcggcgtgccccaacggctcggcgacgctgttcaccgcggcgaag
gtgacccacctcagcctgctgccgcagggcgcgccggaacgcgcgagccgggtgctcgac
atggtggacgcgatggacgccgagggcttcggcggctgcacgaacaccggcgagtgcgtg
gcgtcgtgcccgaagggcatcccgttcaccagcatcgcgacgctcaaccgcgagtacctc
gccgcaacccgctccggccgccgctga
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