Amycolatopsis mediterranei U32: AMED_3611
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Entry
AMED_3611 CDS
T01269
Name
(GenBank) WD-40 repeat-containing protein
Organism
amd
Amycolatopsis mediterranei U32
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
nSTAND1
ANAPC4_WD40
NBCH_WD40
Ge1_WD40
RMC1_N
nSTAND3
AAA_16
ABC_tran
RsgA_GTPase
ART
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ADJ45394
UniProt:
A0A0H3D7A8
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All DBs
Position
3911629..3915321
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AA seq
1230 aa
AA seq
DB search
MVAFAADLRALRAGAGNPAYRELGRRVHYSAASLSEAASGRKLPSLPVTLAYVRGCAGDV
AAWERRWRQVAEELASEPSSVEADEQEPPYIGLSAFRPENAATFFGRTRLVEEVLQRLVT
HRLVGVFGPSGAGKSSLLQAGVIARWQEPARNVVMFTPGEHPSARLDTLPPGDGETLIVV
DQFEEVYTRCQDATERDEFIARLVGLADEADGRCHIVLGVRADFYGHCMDSPHLLAHLRD
AQVAVGAMTAEELREVIVEPAALAGARVESSLLSTLVAQVSGHAGMLPLLSHALLETWRR
RRGNTLTLSSFEAAGGIDGALAKTAEDVYAGFEPDQQLLVRRLFLRLTAVSEDVGDVTAR
AGLDELDGDPGLTFVLERLAAARLVMLDKGSIEMTHETLLRSWPRLREWLAEDREGRRVH
RQLTEAANTWESLDQDSGALYRGVRLDSAGEWVNRTSEQLTVRERQFLDASFAAREQEKT
RERRQRLRLRQLVAVLSVLLLLAVAAGVYAFKSEVGAARDRNIAVSQRAAIEASAERAAH
PALSAQLALAAYHISPTPEARGALLSTFGAPYATQLHGHRGAVGGVAYSADGTLMASASM
DNTIRLYDVHEPHHPEMRAELAGHLAGVNGVVFGRGVLASVSWDHTVRIWDIGNPAHPGD
PITLTGHSDCVNAVAVTADGKTLATGSTDHTVRIWDLSDPEHPVPMGDPLTRHTDTVLSV
AFRRDGKLLATSSSDQTIRLWDTTDPRHPVAVGAPLTGHSGDVSSIAFSPDGHSLVSGGA
DQTLRLWDVTDPAHATQTASAFTRAAVIRAVAFAPDGRTVAAASTDQMVRLWAVGKTELS
ELITFAGHAGAAYSAAFSPDGHTLATGSDDRTVRLWDVAGTLLGGHTNAVYHVALSPDGK
AVATAGYDGTVLVRKIATGDKPIVLTAHQGPVNSVAFAPDGRTMASASADHTVRLWDTHD
LSHITPLGQALPGFTDAVNTVAYSHDGKILAAGGSNRVAVLLDVSDPRAPHTVATIPVGA
GIQELAISPDGRRLAAAGDDSNVWMWDITHPTGLLVPSLLSGHNSDVKSVAFSPDGHFLA
SASRDATVRLWDLDNPRGRDKTPVNPSPDKPLDLTGLIVHPDVVYSVAFSGDGATLASAA
ADGRVRLWDVHDRDHPTALADLTGHTDRVYSVAFGPDGHTLASAGQDHTARLWDIDPGVA
GARVCMLADSPVDRTTWDRYFPGIAYNPPC
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
gtggtggctttcgcggcggatctgcgggcactgcgggccggggcgggaaatccggcgtac
cgcgagctgggccggcgggtgcactattcggcggcgtcgttgtccgaggcggcttcgggg
cggaagctgcccagcctgccggtgacgctggcctacgtgcggggttgcgccggcgatgtc
gccgcctgggagcgacgctggcggcaggtggcggaggagctggcgagcgagccgtcttcg
gtcgaggcggacgagcaggagccgccctacatcgggctgagtgccttccggccggagaac
gcggctacgttcttcgggcgtacccggctggtcgaggaggtgctgcagcggctggtcacg
caccggctggtgggcgtgttcggcccgtccggcgcgggcaaatcctcgctgctccaggcg
ggggtgatcgcccggtggcaggagccggcgcggaacgtcgtgatgttcacgcccggcgag
cacccctcggcgcggctggacacgctgccgccgggggatggcgaaacgctgatcgtggtg
gaccagttcgaagaggtctacacccgttgccaggacgccaccgagcgggacgagttcatc
gcccggctggtgggtctggccgacgaagccgacggccggtgtcacatcgtgctcggcgtg
cgggcggacttctacggccactgcatggattccccccacctgctcgcgcacctgcgagac
gctcaggtcgcggtgggtgcgatgaccgccgaggaactgcgggaagtcatcgtcgaaccg
gctgccttggccggggcgcgcgtggaaagctcgctgctcagcacgctggtcgctcaggtc
agcgggcacgcgggcatgctgccgctgttgtctcacgcgctgctggagacgtggcgccga
cgacgcggtaacaccctgacgctcagcagtttcgaggccgcgggtggcatcgacggtgcg
ctggccaagaccgccgaggacgtgtatgccggattcgaacccgatcagcaattgctggtg
cggcggttgttcctgcggctgaccgcggtcagcgaagacgtcggcgacgtcaccgcccgg
gccggacttgacgagctggacggcgaccccggcctgacgttcgtgctcgagcgactggcc
gcggcgcggctggtcatgctggacaagggctcgatcgagatgacgcacgagacgctgttg
cggtcgtggccgcggctgcgtgagtggctggccgaggatcgcgagggccgccgcgtgcac
cggcagctcaccgaggcggccaacacgtgggaatcgctcgatcaggactccggcgccctc
taccgcggcgtccgcctggactccgccggggaatgggtcaaccgcacgagcgagcagctg
accgtgcgggagcggcagttcctcgacgccagtttcgccgcccgcgaacaggaaaagacg
cgcgaacgccggcagcggctccggttgcggcagctggtggccgtgctgtccgtgctgctg
cttctcgccgtcgcagcgggtgtgtacgcgttcaagtccgaggtcggcgccgcgcgggac
cgcaacatcgccgtgtcccagcgggccgcgatcgaggcatcggcagagcgagcagcgcac
ccggcgctgtcggctcagctggcgctggcggcctaccacatttcgcccacgccggaggcc
cgcggcgcgctgctgagcacgttcggtgccccttacgccacccagctgcacggccaccgg
ggcgcggtcggcggggtcgcgtactcggccgacggcaccctcatggccagcgcaagcatg
gacaacaccatccggctctatgacgtccacgaaccccaccatcccgaaatgcgcgccgaa
ctggccgggcacctggccggcgtcaacggagtcgtgttcgggcgcggcgtgctggccagc
gtgagctgggaccacaccgtccggatctgggacatcggcaatcccgcccaccccggcgac
ccgatcacgttgaccgggcacagcgactgcgtgaacgcggtggccgtcaccgccgacggg
aaaacgctggccaccggcagcaccgaccacacagtgcgaatttgggacctgtccgatccc
gaacacccggtcccgatgggtgatccgctcacccggcacaccgataccgtgctgtcggtg
gcgttccggcgggacggcaagctgctggccacctccagcagcgaccagacgatccggttg
tgggacacgaccgacccgcgccacccggtggccgtcggcgccccgctgaccggccactcc
ggcgacgtctcgtcgatcgcgttcagccccgacgggcattccctggtcagcggcggcgcg
gaccagacgctgcggctgtgggacgtcaccgaccccgcgcacgccacccagaccgcgtcg
gccttcacccgcgcggccgtgatccgcgccgtggccttcgccccggacggacgaaccgtg
gcggcggccagcaccgaccagatggtccggctttgggccgtcggcaagaccgaactgagc
gagctcatcacgttcgccgggcacgccggcgccgcgtactccgccgcgttcagccccgac
gggcacaccctggccaccggcagcgacgaccgcaccgtccggctgtgggacgtggccggc
acactgctcggcgggcacaccaacgccgtgtaccacgtagcgctgtccccggacggcaag
gccgtcgcgaccgccggctacgacggcaccgtcctggtgcggaaaatcgccacaggcgac
aagccgatcgtcctcacggcgcaccaagggccggtgaactccgtcgcgttcgccccggac
ggccgcacgatggcttccgcctcggcggaccacaccgtgcgcctatgggacacgcacgac
ctgagccacatcaccccgctcggccaggccctacccggcttcaccgacgcagtcaacacc
gtggcctacagccacgacggcaaaatactcgccgccggcggcagcaaccgcgtcgccgtg
ctgctggacgtgagcgatccgcgagcaccgcacacggttgcgacgatcccggtgggcgcc
ggcatccaggaactcgccatcagcccggacggtcgccggctcgccgccgcaggtgacgac
agcaacgtctggatgtgggacatcacccacccgacgggcctgctggtgccgtcactgctg
agcggccacaacagcgacgtgaagtcggtggcgttcagcccggacgggcacttcctggcc
agcgcgagccgcgacgcaacggtccgcctgtgggatctggacaatccccgaggccgggac
aagactccggtgaacccgagtcccgacaagcccctcgacctgaccggtctgatcgtgcac
ccggacgtcgtctattcggtggcgttcagcggcgacggcgccacgctggcttctgccgcc
gcggacgggcgggtacggctgtgggacgtccacgaccgagaccacccgaccgccctcgcc
gacctgaccggtcacaccgaccgcgtgtattcggtcgcgttcggtcccgacgggcacacg
ctggccagtgccggccaggaccacaccgcccggttgtgggacatcgaccccggcgtcgcc
ggcgcccgggtgtgcatgctggccgattcaccggtcgaccgcaccacctgggaccgctat
ttccccggcatcgcctacaacccaccttgttga
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