Amycolatopsis mediterranei U32: AMED_3704
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Entry
AMED_3704 CDS
T01269
Name
(GenBank) TetR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
amd
Amycolatopsis mediterranei U32
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amd03000
]
AMED_3704
Transcription factors [BR:
amd03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
AMED_3704
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Ortholog
Paralog
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GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
TetR_C_24
HTH_7
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
ADJ45485
UniProt:
A0A0H3D3E4
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Position
complement(4027213..4027884)
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AA seq
223 aa
AA seq
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MSKAVTTYHQRVAQEKRALIVTAATALFLELGYDRTSLARIAERSGVSRATLFKQFPSKA
ALFDAIVTEAWSTADEEEPPPAGNFVDGLGILGRRYAELLGRARMTDLFRIVIAELPRFP
ELAHAQFSQGKMPYFESVRGYLLAEHEAGTARIEDVDLAATQFLGMISNYVFWPTLLVPG
WEVSAERVAQVVDEAVRTIAARYAATGPGASGPARRSRPSPRS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaggccgtgacgacgtatcaccagcgcgtcgcccaggagaagcgcgcgctgatc
gtgacggccgcgaccgcactgtttctcgagctgggctacgaccggacgtcgctggcgcgg
atcgccgagcgctcgggcgtttcacgggccaccttgttcaagcagtttccgagcaaagcc
gccctgttcgacgccatcgtgaccgaggcatggtcgaccgccgacgaggaggagcctccg
ccggcaggcaacttcgtcgacggactcggcatcctcggtcgccgttacgccgagctgctg
ggccgggcccggatgaccgacctgttcaggatcgtcatcgccgagctgccgcggttcccc
gagctggcccatgcgcagttctcccaagggaagatgccctacttcgagtccgtacgcggc
tatctcctggccgaacacgaggcgggaacggcgcggatcgaggacgtggacctcgcagcc
acccagttcctgggcatgatctccaactacgtcttctggccgaccctcctggtgccgggc
tgggaggtgagcgccgaacgcgtcgctcaggtggtcgacgaggccgtccgcaccatcgcc
gcccggtacgccgcgaccggaccaggggcgtcgggtccagcccgccggtccaggccgtca
ccacgcagctga
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