Amycolatopsis mediterranei U32: AMED_4291 Help Entry AMED_4291         CDS       T01269                                  Symbol topA Name (GenBank) DNA topoisomerase IB   KO K03168   DNA topoisomerase I [EC:5.6.2.1] Organism amd  Amycolatopsis mediterranei U32 Brite KEGG Orthology (KO) [BR:amd00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:amd03032]     AMED_4291 (topA)    03400 DNA repair and recombination proteins [BR:amd03400]     AMED_4291 (topA) Enzymes [BR:amd01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.1  DNA topoisomerase      AMED_4291 (topA) DNA replication proteins [BR:amd03032]  Prokaryotic type   DNA Topoisomerases    AMED_4291 (topA) DNA repair and recombination proteins [BR:amd03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHIIR (short-homology-independent illegitimate recombination)      Facilitator       AMED_4291 (topA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Top1B_N_bact Topoisom_I Glyco_hydro_19 Motif Other DBs NCBI-ProteinID:  ADJ46065 UniProt:  A0A0H3D500 LinkDB All DBs Position complement(4693186..4694199) Genome browser AA seq 337 aa AA seqDB search MGRIRLRRSDLRGPGIKRIRRGRGFSYAMPDGSPVTDAELLARIKDLVIPPAWKNVWICP YPNGHVQAVGTDDAGRRQYLYHEQWRRDRDEEKHDRVLQMARRLPQWRASVAEDLTGPGL TRKRVLAAALRMLDRGIFRTGGEEYAEENGTHGVATLLRSHAAVRGDECRFCYVAKGGLD REVAICDAELAAVMKSLLRSRSGSDRLLVYREGGTWHEVHAADINERFKELAGEDCTAKD MRTWNATVLAAAAFAAADPPTSETARKRAEAKVMKEVSTALGNTPAVCRSSYVDPRLVEA YRAERTIAPALKRAAKLDGDDARAVLEKACARLLKAS NT seq 1014 nt NT seq  +upstreamnt  +downstreamnt gtgggacgcatcagactccggcgcagtgacctgcgcggcccgggcatcaagcgcatccgc cgcggccgcgggttctcctacgccatgcccgacggctcgccggtgaccgacgccgagctg ctggcccggatcaaggacctcgtcatcccgcccgcgtggaagaacgtgtggatctgcccg tacccgaacgggcacgtccaggcggtcggcaccgacgacgccgggcggcgccagtacctc taccacgagcagtggcggcgtgaccgggacgaggagaagcacgaccgcgtgctgcagatg gcccgccggctgccgcagtggcgcgcctcggtggcggaagacctcaccggacccggcctg acgcgcaagcgggtgctggcggcggcgctgcgcatgctcgaccggggcatcttccgcacc ggcggcgaggagtacgcggaggagaacggcacccacggcgtcgcgacgctgctgcgctcg cacgccgcggtccggggcgacgagtgccggttctgctacgtcgccaagggcggcctggac cgcgaggtggccatctgcgacgccgagctggccgcggtgatgaagtcgctgctgcgcagc cggtccggcagcgaccgcctgctggtctaccgcgagggcggcacgtggcacgaggtgcac gccgcggacatcaacgagcggttcaaggagctggcgggcgaggactgcacggcgaaggac atgcggacgtggaacgcgacggtcctggcggcagcggcgttcgccgcggcggaccccccg acgtccgaaacggcccgcaagcgcgcggaggcgaaggtgatgaaggaggtctcgacggcg ctcgggaacacccccgcggtctgccgatcgtcctatgtggacccccggctggtggaggct taccgcgccgaacggacgatcgcgcccgcgctcaagcgcgcggcgaagctcgacggggac gacgcacgggcggtgctggagaaggcgtgcgcgcggctgctgaaggcgtcgtga

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