Amycolatopsis mediterranei U32: AMED_4397
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Entry
AMED_4397 CDS
T01269
Name
(GenBank) periplasmic substrate-binding component of ABC-type sugar transport system
KO
K23508
galactofuranose transport system substrate-binding protein
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AMED_4397
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amd02000
]
AMED_4397
Transporters [BR:
amd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Galactofuranose transporter
AMED_4397
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Peripla_BP_6
ABC_sub_bind
Aminotran_5
DUF6068
Motif
Other DBs
NCBI-ProteinID:
ADJ46168
LinkDB
All DBs
Position
4813904..4814887
Genome browser
AA seq
327 aa
AA seq
DB search
MNVLKKRWAAAAAAAAGLVLLTACGSGGSSGSSAGGAVTLGFAQVGAESGWRTANTKSIQ
ESAKTAGIELKFSDAQQKQENQISAIRSYIQQKVKVIAFSPVVESGWDTVLKEAKTANIP
VILTDRAIDSPDKSLYKTFLGSDFVAEGKKAGEWLTKEYGSATGDVNIVELQGTTGSAPA
NDRKKGFGDVIAADPKYKIVASQTGEFTRAKGKEVMEAFLKSQPKIDVLYAHNDDMALGA
IEAIEAAGKVPGKDIKIVSVDAVKDGMQALADGKINHIVECNPLLGPQLMDLVKKVAAGE
QVPARIETKETEFDQAAAKTALPQRQY
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtgctgaagaagcgatgggccgccgcggcggccgcggcggccggactcgtgctg
ctcaccgcctgcgggagcggcggttcgtccggcagctcggccggcggagccgtcacgctc
ggcttcgcccaggtgggcgccgagagcggctggcggacggcgaacacgaagtcgatccag
gaatcggcgaagaccgccgggatcgaactcaagttctccgacgcgcagcagaagcaggag
aaccagatctccgcgatccgctcgtacatccagcagaaggtcaaggtcatcgccttctcg
ccggtcgtcgagtccggctgggacaccgtcctcaaggaggccaagacggccaacatcccg
gtcatcctcaccgaccgggcgatcgactcgccggacaagtccctctacaagaccttcctc
ggctcggacttcgtcgccgagggcaagaaggcgggggagtggctgaccaaggagtacggc
agcgccaccggcgacgtgaacatcgtcgagctgcagggcaccaccggctcggcgccggcg
aacgaccgcaagaagggcttcggtgacgtcatcgcggcggacccgaagtacaagatcgtc
gcctcgcagaccggtgagttcacccgcgccaagggcaaggaggtcatggaggccttcctg
aagtcccagcccaagatcgacgtcctctacgcccacaacgacgacatggccctcggtgcc
atcgaggccatcgaagccgcgggcaaggtcccgggcaaggacatcaagatcgtctcggtc
gacgccgtgaaggacgggatgcaggcgctcgccgacggcaagatcaaccacatcgtcgag
tgcaacccgctgctcggcccgcagctgatggacctggtgaagaaggtcgcggccggcgag
caggtgcccgcccgcatcgagaccaaggaaaccgagttcgaccaggcggcggccaagacc
gcactgccgcagcgccagtactga
DBGET
integrated database retrieval system
