Amycolatopsis mediterranei U32: AMED_4437
Help
Entry
AMED_4437 CDS
T01269
Symbol
pel
Name
(GenBank) pectate lyase
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00040
Pentose and glucuronate interconversions
amd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AMED_4437 (pel)
Enzymes [BR:
amd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AMED_4437 (pel)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase
Motif
Other DBs
NCBI-ProteinID:
ADJ46208
UniProt:
A0A0H3D809
LinkDB
All DBs
Position
4865609..4866379
Genome browser
AA seq
256 aa
AA seq
DB search
MSRTIRVAAVAALVVSAAIGTGATASAASWPNPSTSVPVPKTIKVTSGTYDGGLKRFYGT
GDLGTGGQSEDQSPIFELSNGTTLKNVVLGSPAADGVHCLGTCTLLNVWWEDVGEDAATF
KGTSASQTMTIDGGGARKASDKVFQHNGPGTMYIRNFQVNDFGKLYRSCGNCKTQYKRNV
VVDNVTATVPGKALVGINTNYGDTAKLTRITIVGDSSRKIEPCTKYQGVTSGEPTKIGSG
PDSTNCLYTAANITYK
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggacgatccgggtggcggcggtcgccgcgctcgtcgtttcggcggcgatcggc
accggcgccaccgcgtcggccgcctcgtggccgaacccgagcaccagcgtgccggtgccg
aagacgatcaaggtcaccagcggcacctacgacggcgggctcaagcggttctacggcacc
ggcgacctcggcaccggcggccagagcgaggaccagagcccgatcttcgagctctccaac
ggcaccacgctcaagaacgtcgtcctcggcagcccggccgccgacggcgtgcactgcctc
ggcacctgcacgctgctcaacgtctggtgggaggacgtcggcgaagacgccgcgaccttc
aagggcacctccgcctcccagacgatgaccatcgacggcggcggcgcgcgcaaggcgtcg
gacaaggtgttccagcacaacggccccgggacgatgtacatccgcaatttccaggtcaac
gacttcggcaagctgtaccgctcctgcggcaactgcaagacgcagtacaagcgcaacgtc
gtcgtggacaacgtcaccgccaccgtgcccggcaaggcgctggtcggcatcaacaccaac
tacggggacaccgccaagctgacgaggatcaccatcgtcggcgattccagccgcaagatc
gagccctgcacgaagtaccagggcgtgaccagcggcgagccgacgaagatcggcagcggc
ccggactcgacgaactgcctctacaccgcggcgaacatcacctacaagtaa
DBGET
integrated database retrieval system
