Amycolatopsis mediterranei U32: AMED_4542
Help
Entry
AMED_4542 CDS
T01269
Symbol
rhaS
Name
(GenBank) periplasmic substrate-binding component of ABC-type sugar transport system
KO
K10559
rhamnose transport system substrate-binding protein
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AMED_4542 (rhaS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amd02000
]
AMED_4542 (rhaS)
Transporters [BR:
amd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
AMED_4542 (rhaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
ADJ46312
UniProt:
A0A0H3D7P8
LinkDB
All DBs
Position
4993009..4994070
Genome browser
AA seq
353 aa
AA seq
DB search
MSRRFLTGAVSAGLVLVLAACSGTTKNDNAASGASESTAAANPNAAAKEGVKMAFLPKQL
NNPYSDIEVSGGKAALGELKGEYKLVGPNDASASSQVSYINTLIQQQQDVIGIAANDPNA
VCPSLNQARSAGIKVVAFDSDAAKDCRDAFINQATTQGIGEALAKQAKDLSGGSGEIAVL
SATPNATNQNAWIDVLKKELAKPEYSTLKLDKVAYGNDDDQKSFQEAQGLLQSFPNLKVI
VAPTTVGIAAAARYVSSSSYKGKVAVTGLGTPNQMRAFVKDGTVKQFALWNPADIGYLAA
YAGVALKSGQITGKQGEKFKAGKLGDYTIGENGEIVLGPPTTFDANNIDKFNF
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacggttcctcaccggcgcagtgtcggccgggctggtgctggtcctggccgcg
tgcagcggtacgaccaagaacgacaacgccgcctccggcgcgagtgagtccaccgccgcg
gcgaacccgaacgccgcggcgaaggagggcgtcaagatggcgttcctgcccaagcagctc
aacaacccctacagcgacatcgaggtcagcggcggcaaggcggccctcggcgagctgaag
ggcgagtacaagctggtcgggccgaacgacgccagcgcgtcgtcgcaggtcagctacatc
aacacgctgatccagcagcagcaggacgtcatcggcatcgccgcgaacgacccgaacgcg
gtgtgcccgtcgctcaaccaggcccgcagcgccggcatcaaggtcgtcgcgttcgactcc
gacgccgccaaggactgccgcgacgccttcatcaaccaggccaccacccagggcatcggc
gaggcgctggccaagcaggccaaggacctctccggcggctccggcgagatcgcggtgctg
tccgcgacgccgaacgcgacgaaccagaacgcctggatcgacgtcctgaagaaggaactg
gccaagccggagtactcgaccctgaagctggacaaggtcgcctacggcaacgacgacgac
cagaagtcgttccaggaggcccagggcctgctgcagtcgttcccgaacctcaaggtgatc
gtcgcgccgacgaccgtcggcatcgcggccgccgcgcggtacgtcagctcgtcgagctac
aagggcaaggtcgcggtgaccgggctgggcacgccgaaccagatgcgcgccttcgtcaag
gacggcacggtgaagcagttcgcgctgtggaacccggccgacatcggctacctcgccgcc
tacgccggcgtggcgctcaagtccggccagatcaccggcaagcagggcgagaagttcaag
gcgggcaagctcggcgactacacgatcggcgagaacggcgagatcgttctcggcccgccg
acgacgttcgacgcgaacaacatcgacaagttcaacttctga
DBGET
integrated database retrieval system
