Amycolatopsis mediterranei U32: AMED_4552
Help
Entry
AMED_4552 CDS
T01269
Name
(GenBank) alpha-xylosidase
Organism
amd
Amycolatopsis mediterranei U32
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_31_2nd
Glyco_hydro_31_3rd
CBM_6
CBM_35
DUF5110
CBM_35_2
LAMININ_IV_B
Motif
Other DBs
NCBI-ProteinID:
ADJ46322
UniProt:
A0A0H3D7Q7
LinkDB
All DBs
Position
5004095..5007313
Genome browser
AA seq
1072 aa
AA seq
DB search
MRTRTARTIRRAFALVAAGSAVAAVTVATPAVAGPARQTVAAGNARFQVLSPTVIRAEYA
GDGRFTDAATFNAVGRGAFTPTSYTSTVSGGVLTIKTSAATLTYRLNSGPFDGGNLEIRT
SAGATPVLAAPWHHLTCAAGARCEAEDLTTDGLGIATDHSGYTGEGFLAGFESTGNSVTA
DVLAPTAGTYSVTARYANGQGGDGQYVTRTLSVSVDGGAAQKLTLPVTADWNAWALASVP
VTLAAGHHSVRLERTAADSGDVNLDGLAVLTAGAAFPPASARAFTGCPAGTSCEAEAGLR
SGSAVVATDHTGYAGRGFVAELNRGSTLTHRVSDVPADGTYLLHVRYANGTGGDGRHEMR
TAAVTANGVTRTLTLPITDGWDAWKSASVPVDLKAGTNDVVLGCPEDTSCHVNVDTVAVT
PAGGTAPPPHLALGGYRRGLDGVNGDNGTPSTTEGLLHQDGWYLLDDTISALYDPQTRAV
TQRPSHGGNPYQDGYLFAFGHDYKAGLRDLATLTGPPQLLPRWAYGVWYSEYIDRTAADY
RDRILPRFRSEGVPLDVLVTDTDFKAPDTWNGWQFDTAKFPDPAGFFAWSKAQGLHNNLN
IHPSIMGSDPQFARAQATAKGKLAKSNCGTDCYVFDWGDPDQLKAYLDLHAGMMKQGNDF
WWLDWCCDASRSSLPGVTPDAWINQQYADLAAPATGRGFVISRAYGSLQAGGYGGPTGLA
TGPWADKRSTLHFTGDTSSTWGTLRMEVGITPAESAATGMSAISHDIGGHNDTTGLRGSE
TYTSGGQQHQTAKLPDDMYARWVQLGTFQPIDRLHSNHSDRLPWQYGDAAKASATKFLNL
RENLVPTTYTLAQQAATTGVPVVRPTYLEYPDEPGAYAAAQSEYFYGPDMLVAPVTSPGT
SATTSVWFPPGQWTDYFTGKTYAGGTTQQVTSDLGTMPVFLRAGGITATRTADVANDVQN
PLDRATVTVAPGGSGTFSLYEDNGVSSSRSSSTKITYSECSGAHTVTVSPAQGSFRAAPR
EWTVKFLGVAAAPSRVKVGTGWAPSTAWKWDAATKTLTVTAPAHPGPVTVTY
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
gtgcggaccagaacagcgagaaccatccggcgggccttcgcgctcgtcgccgccgggagc
gccgtcgcggcggtgaccgtcgcgacgcccgccgtggccgggcctgcgcgccagaccgtc
gccgccgggaacgcccgcttccaggtgctgtccccgaccgtgatccgcgccgagtacgcg
ggcgacggccgcttcaccgacgccgccaccttcaacgccgtcggccgtggcgccttcacg
ccgacgtcgtacaccagcacggtttcgggcggcgtcctcacgatcaagacgagcgcggcg
acgctgacctaccggctgaactccggcccgttcgacggcggcaacctcgagatccgcacg
agcgcgggcgcgaccccggtgctcgcggccccctggcaccacctgacctgcgccgccggt
gcccggtgcgaggccgaagacctcaccaccgacgggctcggcatcgcgaccgaccactcc
ggctacaccggcgaaggcttcctcgccgggttcgagagcaccgggaactcggtgacggcg
gacgtcctcgcacccaccgcggggacgtactcggtgaccgcgcgctacgccaacggccag
ggcggcgacggccagtacgtcacgcgcaccctgagcgtttcggtcgacggcggcgcggcg
cagaagctcaccctgcccgtgacggccgactggaacgcctgggccttggcctcggtgccg
gtcaccctcgccgccgggcaccacagcgtccgcctcgagcggaccgcggccgattccggc
gacgtcaacctcgacggcctggccgtgctgaccgccggtgccgccttcccgccggcctcg
gcgcgcgcgttcaccggctgcccggccgggacgagctgcgaggccgaggccgggctgcgc
tcggggtccgccgtcgtggcgaccgaccacaccgggtacgccgggcgcgggttcgtcgcc
gagctcaaccgcggctcgacgctgacccaccgcgtctcggacgtcccggccgacggcacc
tacctgctgcacgtccgctacgccaacggcaccggaggcgacggccgtcacgaaatgcgc
accgcggctgtcaccgcgaacggcgtcacccgcacgctgacgctgccgatcaccgacggc
tgggacgcctggaagagcgcgtccgtgccggtggacctgaaggcgggcacgaacgacgtc
gtcctcggctgtcccgaggacaccagctgccacgtcaacgtcgacaccgtcgccgtcacc
ccggccgggggcacggcgccgccgccgcacctcgcgctcggcggctaccggcgcggcctc
gacggcgtcaacggcgacaacggcacgccgtcgaccaccgaaggcctcctgcaccaggac
ggctggtacctgctcgacgacaccatctccgcgctgtacgacccgcagacccgcgccgtg
acgcagcggccgtcgcacggcggaaacccctaccaggacgggtacctcttcgcgttcggc
cacgactacaaggccgggctgcgtgatctcgcgaccctgaccgggccgccgcagctgctg
ccgcgctgggcctacggcgtctggtactccgagtacatcgaccgcaccgcggccgactac
cgcgatcgcatcctgccgcggttccgcagcgaaggcgtcccgctggacgtcctggtgacc
gacaccgacttcaaggcgccggacacgtggaacggctggcagttcgacaccgcgaagttc
cccgacccggccggtttcttcgcctggtcgaaggcccagggcctgcacaacaacctgaac
atccaccccagcatcatggggtcggacccgcagttcgcccgcgcccaggcgacggcgaag
ggcaagctggccaagtcgaactgcggcaccgactgctacgtcttcgactggggcgacccg
gaccagctcaaggcctacctcgacctgcacgcgggcatgatgaagcagggcaacgacttc
tggtggctcgactggtgctgtgacgcctcgcgctcgagcctgcccggcgtgaccccggac
gcgtggatcaaccagcagtacgccgatctcgcggctcccgcgaccggccgcgggttcgtc
atctcgcgggcgtacggctcgctgcaggcgggcggctacggcggtccgacggggctggcg
acggggccgtgggcggacaagcgcagcacgctgcacttcaccggcgacacgtcctcgacg
tggggaacgctgcggatggaggtcggcatcacgccggcggagtcggcggcgaccggcatg
tcggcgatcagccacgacatcggcggccacaacgacacgacgggcctgcgcggcagcgag
acctacacttccggcgggcagcagcaccagacggccaagctgccggacgacatgtacgcg
cggtgggtgcagctcggcacgttccagccgatcgaccgcctgcacagcaaccacagcgac
cggctgccctggcagtacggcgacgcggccaaggcgtcggcgacgaagttcctgaacctg
cgggagaacctggttcccaccacctacacgctggcccagcaagcggcgacgacgggcgtt
ccggtggtccgcccgacgtacctggagtacccggacgagccgggcgcgtacgcggcggcc
cagagcgagtacttctacgggccggacatgctggtggcaccggtgacgtccccgggcact
tcggcgacgacgtcggtgtggttcccgccggggcagtggacggactacttcaccggcaag
acctacgcgggcgggacgacccagcaggtgacgtccgacctgggcacgatgccggtgttc
ctccgcgcgggcggcatcacggccacgcggacggccgacgtcgccaacgacgtccagaac
ccgctggaccgggcgacggtgacggtggcgccgggcggatccgggacgttctcgctgtat
gaggacaacggcgtgtcgtcgtcgcgttcgtcgtcgacgaagatcacctacagcgagtgc
tccggggcgcacacggtgacggtgtcgcccgcgcagggctcgttccgggcggcgccccgc
gagtggacggtgaagttcctcggcgtggccgcggccccgagccgggtgaaggtgggaacc
ggctgggcgccgtcgacggcgtggaagtgggacgcggcgacgaagacgctgaccgtgacc
gcgccggcccacccgggcccggtgacggtcacgtactga
DBGET
integrated database retrieval system
