Amycolatopsis mediterranei U32: AMED_4597
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Entry
AMED_4597 CDS
T01269
Symbol
lacZ
Name
(GenBank) beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00052
Galactose metabolism
amd00511
Other glycan degradation
amd00600
Sphingolipid metabolism
amd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
AMED_4597 (lacZ)
09103 Lipid metabolism
00600 Sphingolipid metabolism
AMED_4597 (lacZ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
AMED_4597 (lacZ)
Enzymes [BR:
amd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
AMED_4597 (lacZ)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2_N2
Glyco_hydro_2
Motif
Other DBs
NCBI-ProteinID:
ADJ46367
UniProt:
A0A0H3D7V1
LinkDB
All DBs
Position
complement(5056316..5059147)
Genome browser
AA seq
943 aa
AA seq
DB search
MSYLEDPGPGRGALPPRAAFTSDAPTLSLNGTWRFRLSPSLAAAPAGIEAGEFDDSAWDE
LPVPSLWQLHGHGRPAYTNVRYPFPVDPPHVPSDNPTGDHRLRFDLPAGWPAGSAVLRFD
GIDSCGRIWLNGTELGVTQGSRLPSEFEVGPLLRPAGNVLVVRVHQWSAGSYLEDQDMWW
LSGIFRAVTLLARPDGGIGDYWVRADYDHTTGLGTVRVETGPDVVLDIPELGVSAHPAGE
ALELPVEPWSAETPRLYEGTLATAAERVPVRIGFRTVHIEDGRLKVNGRPLMLRGVNRHE
HDPRTGRVVSPETALADVLLMKRHNVNAVRTSHYPPDPAFLELCDTHGLWVIDECDLETH
GFEPLGWAGNPSGDPIWAEAYLDRMRRTVERDKNRPSVILWSLGNESHTGENLARMAEWV
RHRDPTRPVHYEGDHECAYVDVHSRMYATHEDVERIGRREDANERRRDLPFLQCEYGHAM
GNGPGGLLEYRELFERYPNCQGGFLWEWIDHGLAAEGHFAYGGDFGEPIHDGNFVIDGLL
FPDRTPSPGLVEFAKVIEPVRIDADATGIRVSNHYDFVSTGHLTFTWVLEEEGTAVAHGV
LDVPAVHSGQSTSVPLPGLPATRGESWLTVSASLTAATAWAPAGHVVGWGQLAVSAAPAA
APLPSRGPVFRTGGRLVLGVGEFDPVTGRLATLGGHIVHGPRLDVWRATTDNDRGTFAGR
PAADQWREAGLHRMQHRVITVDADGEELVVRTRVAPPAQPFGLFADYTWTAFGDRLRLRV
EVTPDGEFPGTLPRLGLAMAIPGALGSAEWFGGGPGEAYPDSRQAARIGRFSSSVDGLQT
PYVFPQENGNRTAVRWARLTAPDGTGIRVDGEPVFDFTARRWTAAALEEARHTDDLVPGE
LVHLTLDVAQHGLGTASCGPGVLPRYRLVAQKTEFTLWFRPAA
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacctcgaagaccccggccccggccgcggtgcgcttccgccgcgcgcggccttc
acctccgacgcgcccacgctgtcgctgaacggcacgtggcggttccggctgtcgccgagc
ctcgcggccgcgccggcggggatcgaagccggggagttcgacgactcggcgtgggacgag
ctgccggtgccgtcgctgtggcagctgcacggccacgggcggccggcctacacgaacgtg
cgctacccgttcccggtcgacccgccgcacgtgccgtcggacaacccgaccggcgaccac
cggctgcggttcgacctgcccgccggctggcccgccgggtccgcggtgctgcgcttcgac
ggcatcgactcgtgcggccggatctggctcaacggcaccgaactcggcgtcactcagggc
agcaggctgccgtcggagttcgaggtcgggccgctgctgcggccggccgggaacgtcctc
gtggtgcgggtgcaccagtggtcggcgggcagctacctcgaagaccaggacatgtggtgg
ctgtccggcatcttccgcgccgtcaccctcctcgcccgcccggacggcggcatcggcgac
tactgggtgcgcgccgattacgaccacaccaccggcctcggcacggtccgggtcgaaacc
ggcccggacgtcgtgctggacattcccgagctgggcgtctccgcgcacccggccggggag
gcgctggagctgccggtcgagccgtggagcgccgagaccccgcggctgtacgaaggcacg
ctggccaccgcggccgagcgggtgccggtgcggatcgggttccggacggtgcacatcgag
gacggccggctcaaggtcaacggccgtccgctgatgctgcgcggggtgaaccgccacgag
cacgacccgcgcaccgggcgcgtggtgtcgccggagacggcactggccgacgtgctgctg
atgaagcggcacaacgtcaacgcggtccggaccagccactacccgcccgacccggcgttc
ctcgagctctgcgacacccacggcctgtgggtgatcgacgagtgcgacctggagacgcac
ggcttcgagccgctgggctgggccggcaaccccagcggcgacccgatctgggccgaggcg
tacctcgaccggatgcggcgcacggtggagcgggacaagaaccggcccagcgtgatcctc
tggtcgctgggcaacgaaagccacaccggcgagaacctggcgcggatggccgagtgggtg
cgccaccgcgacccgacgcggccggtgcactacgaaggcgaccacgagtgcgcgtacgtc
gacgtgcacagccggatgtacgccacgcacgaggacgtcgagcggatcggccgccgggaa
gacgccaacgagcgccggcgggacctgccgttcctgcagtgcgaatacgggcacgcgatg
ggcaacggcccgggcggcctgctcgagtaccgcgagctgttcgagcggtacccgaactgc
cagggcgggttcctctgggagtggatcgaccacgggctcgccgccgaggggcacttcgcc
tacggcggcgacttcggcgaaccgatccacgacggcaacttcgtcatcgacggcctgctc
ttccccgaccggacgccgtcaccggggctggtcgagttcgcgaaggtcatcgagccggtc
cggatcgacgcggacgcaaccgggatccgggtcagcaaccactacgacttcgtcagcacc
gggcacctcacgttcacctgggtgctggaggaggaaggaaccgcggtcgcccacggcgtc
ctcgacgtgcctgctgtccattccggacagagcacttcggtcccgctgcccgggctgccc
gcgacgagaggtgagtcgtggttgaccgtgtcggcgtcgctgaccgcggcgacggcgtgg
gcgccggccgggcacgtcgtcggctggggacagctcgcggtgtcggcggcccccgccgcg
gcgccgctcccttcgcgcgggccggtgttccgcaccggcggacggctggtgctgggcgtc
ggcgagttcgacccggtgacgggcaggttggcgaccctcggcgggcacatcgtccacggg
ccgcggctcgacgtgtggcgcgcgacgaccgacaacgaccgcggcacgttcgccgggcgg
ccggccgccgaccagtggcgcgaggccgggctgcaccggatgcagcaccgcgtgatcacg
gtcgacgccgacggcgaggagctggtggtgcgcacccgggtcgccccgccggcccagccg
ttcgggctgttcgccgactacacgtggacggcgttcggcgaccgcctgcggctgcgcgtc
gaggtgaccccggacggcgagttccccggcaccctcccccggctcgggctggcgatggcg
atcccgggcgcgctcggctcggcggagtggttcggcggcggcccgggcgaggcgtacccg
gacagccgccaggcggcgcggatcggccggttttccagcagcgtcgacggcctgcagacg
ccgtacgtgttcccgcaggagaacggcaaccgcacggcggtccgctgggcgcggctgacg
gccccggacggcacgggcatccgggtggacggcgaaccggtcttcgacttcacggcccgc
cgctggaccgcggcggcgctggaggaggcccggcacaccgacgacttggtgccgggtgag
ctggtgcacctgacgctggacgtggcccagcacggcctcgggacggcgtcgtgcgggccg
ggggtgctgccgcggtaccggctggtggcgcagaagaccgagttcacgttgtggttccgc
ccggcggcctag
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