Amycolatopsis mediterranei U32: AMED_4655
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Entry
AMED_4655 CDS
T01269
Name
(GenBank) periplasmic substrate-binding component of ABC-type dipeptide/oligopeptide transport system
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMED_4655
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amd02000
]
AMED_4655
Transporters [BR:
amd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AMED_4655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
MIMI_R596-like_C
Motif
Other DBs
NCBI-ProteinID:
ADJ46424
UniProt:
A0A0H3DA57
LinkDB
All DBs
Position
5134659..5136491
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AA seq
610 aa
AA seq
DB search
MGWFSVQFQHRAGRFARVGAVVAAATLAAIPLAAPAQAQQGKVLRVALTTGIDHLNPFTA
VLSASTQIGRFTFEFLTVPDAAKAEASPALAESWTPSPDKLTWTFKIRSGVKWSDGQPVT
AKDAAFTFNRMLKDENARTANGNYVANFETVTAPDDTTLVIKTKTVQVNMNLLDVPIVPQ
HIWEPVTDLKAASTDTLAVAGVSDGPFQLTEYKPNEYVKFKANKDYWRGAPKVDELQLLQ
FKDSEAAVNALKQGEVDVINRLNPNQFDALRGRQGITTNAAPGRRYDELAINFGVADNAG
NPIGDGNPVLKDLTLRKAIAQAVDTKTIVDKVLKGLGQVGGGVVPAVYAAYHWDPSDAER
IKFDLAAANTTLEQAGYRKGPDGVRTAPGGAKLELRLTGHANRSYDQAVAQYVTGWLKDI
GITVKQDLVSDDELSDRTEAGKYDLAIGGYGTNPDPDYALSLHTCGARPTPDGKGGSTDT
FFCDAQYDDLYKKQLTETDDAKRAGYVKQAQARLYSQVPTIVLDYQNALEAYRSDKFSGF
TTQPQPKGAILEQTGYWGVYGATPAGTTNAADSGSGNTVLWIVIGAVVVVVLVGGGIMLG
RRGKTAEDRE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggggtggttttcggtgcagttccaacacagagccgggcggttcgcccgcgtgggcgcg
gtcgtcgcggccgcgacactggcggcgatcccgctcgccgctcccgcgcaggcccagcag
ggcaaggtgctgcgggtcgcgctcaccaccggcatcgaccacctcaaccccttcaccgcg
gtgctctcggcgtccacgcagatcggccggttcaccttcgagttcctgaccgtcccggac
gcggcgaaggccgaggcttcgcccgcgctcgccgagtcgtggaccccgtcgccggacaag
ctgacctggaccttcaagatccgcagcggcgtcaagtggagcgacgggcagccggtgacc
gccaaggacgcggccttcaccttcaaccgcatgctcaaagacgagaacgcccgcaccgcc
aacggcaactacgtggccaacttcgagacggtcaccgcgcccgacgacaccaccctggtc
atcaagaccaagacggtgcaggtcaacatgaacctgctcgacgtgccgatcgtgccccag
cacatctgggagccggtcaccgacctcaaggccgcctcgaccgacaccctcgccgtcgcc
ggcgtctccgacgggcccttccagctcaccgagtacaagccgaacgagtacgtcaagttc
aaggccaacaaggactactggcgcggcgccccgaaggtcgacgaactgcagctgctgcag
ttcaaggacagcgaagccgcggtcaacgcgctcaagcagggcgaagtcgacgtcatcaac
cggctcaaccccaaccagttcgacgcgctgcggggccggcagggcatcaccaccaacgcc
gcccccggccgccgctacgacgagctggcgatcaacttcggcgtcgccgacaacgccggc
aacccgatcggggacggcaacccggtcctcaaggacctcaccctgcgcaaggccatcgcg
caggccgtggacaccaagaccatcgtcgacaaggtcctcaagggcctcggccaggtcggc
ggcggcgtcgtgcccgccgtctacgccgcctaccactgggaccccagcgacgccgaacgc
atcaagttcgacctcgccgccgccaacaccaccctcgagcaggccggctaccgcaagggc
cccgacggcgtccggacggcccccggcggcgcgaagctggaactgcgcctgaccgggcac
gccaaccgcagctacgaccaggccgtcgcccagtacgtcaccggctggctcaaggacatc
ggcatcaccgtcaagcaggacctcgtctccgacgacgagctgtccgaccgcaccgaggca
ggcaagtacgacctcgccatcggcggctacggcaccaaccccgacccggactacgcgctg
tcgctgcacacttgcggcgcgcgccccaccccggacggcaagggcggcagcaccgacacg
ttcttctgcgacgcccagtacgacgacctctacaagaagcagctcaccgaaaccgacgac
gccaagcgcgccggctacgtcaagcaggcccaggcccggctctacagccaggtcccgacc
atcgtgctcgactaccagaacgccctcgaggcctaccgctccgacaagttctccggcttc
accacccagccgcagcccaagggcgcgatcctcgagcagaccggctactggggtgtctac
ggcgccaccccggccggcaccacgaacgccgcggactccggcagcggcaacaccgtgctg
tggatcgtcatcggcgcggtcgtcgtggtggtcctcgtcggcggcggcatcatgctcggc
cgccgcggcaagacggccgaggaccgcgagtaa
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