Amycolatopsis mediterranei U32: AMED_4835
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Entry
AMED_4835 CDS
T01269
Name
(GenBank) rhs element Vgr protein
Organism
amd
Amycolatopsis mediterranei U32
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Gene cluster
GFIT
Motif
Pfam:
Phage_base_V
Phage_GPD
DUF3540
YQBQ
DUF2345
Sarcoglycan_1
DUF6484
Motif
Other DBs
NCBI-ProteinID:
ADJ46601
UniProt:
A0A0H3D7H4
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Position
complement(5351931..5353754)
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AA seq
607 aa
AA seq
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MANETFTNTLVVEVEGTALPDDVRVMLGYAYVDDSRNLPDTFVLRFRDPGAVVLEKGKFK
VGAKIKLKVQTSDPEGPQDLLSGEVTAVAVDLDPHGTFTEVRGYDHAHRLFRGRRVAAYP
NMTIADVVRKVARRANLPAGKIDDVKGVGGRPNAQLSQDNVSDWEFLSRLADVVGAQIAV
RDGKLNFELPEKPSGAPSPTTKATADPLVLEAHGTLLSLRASVTAAEQVPEVRVNGWDYE
NKQPITATATPKNAGTDVPGVDPVALAGKFASPPFLDAAAPRRTQGEADATAKALADRFG
SACTELDGVAKGNPKLRAGAAVTLTGVGQPFSGKYTLTSTRHLFNDEVGYTTEFAVSGRQ
ERSLYGLVAGGAKPSSWPGVVPAQVTDLKDPAKLGRVKLTFPWLDKEFTSTWARTVQPGA
GKDRGALVLPEVGDEVLVGFEHGDFEAPYVLGGLYNSKDTAPSKFTKAVVDGNSGEVALR
GFVSRKGHKLEFAEDDGIILSSGDAKFVVKIDQKNQVIEVTSGKSVTVKAQNGVSIDAGS
GPLELKGQKVSVKSQTDASIEASSQLKLNGTAGVKVEGATVSVAGQGQTELTASGVVTVR
GSVVKIN
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgaaaccttcacgaacaccctcgtggtcgaggtcgaaggcaccgcgctgccc
gacgacgtccgggtgatgctcggctacgcctacgtcgacgacagccggaacctgccggac
accttcgtgctgcgcttccgcgaccccggtgccgtcgtgctggagaagggcaagttcaag
gtcggggcgaagatcaagctcaaggtccagacgtccgaccccgagggcccgcaggacctg
ctttcgggcgaggtcaccgcggtcgccgtcgacctggacccgcacggcacgttcaccgag
gtccgcgggtacgaccacgcgcaccggctgttccgcggccgccgggtcgcggcgtacccg
aacatgacgatcgccgacgtcgtgcgcaaggtcgcccggcgcgcgaacctgccggccggg
aagatcgacgacgtcaagggcgtcggcggccggccgaacgcccagctgagccaggacaac
gtcagcgactgggagttcctgtcccggctggccgacgtggtgggcgcgcagatcgccgtc
cgggacgggaagctgaacttcgagctcccggagaagccgtccggcgcaccctcgccgacc
accaaggcgaccgccgacccgctggtcctcgaggcccacgggacgctgctcagcctgcgc
gccagcgtcaccgcggccgagcaggtccccgaggtgcgggtcaacggctgggactacgag
aacaagcagccgatcaccgccaccgcgaccccgaagaacgcgggcacggacgtgccgggc
gtggacccggtcgcgctggcgggcaagttcgcgagcccgcccttcctcgacgccgccgcg
ccccggcgcacccagggcgaggcggacgcgaccgccaaggcgctggccgaccggttcggc
agtgcctgcaccgagctcgacggcgtcgcgaagggcaacccgaagctgcgtgcgggcgcc
gccgtcacgctcaccggcgtcggccagcccttctcgggcaagtacacgctgaccagcacc
cgccacctgttcaacgacgaagtcggctacaccaccgagttcgccgtgtcggggcgccag
gaacgctcgctgtacggcttggtcgcgggcggggcgaagccctcgtcgtggccgggtgtc
gtccccgcgcaggtgaccgacctcaaggacccggcgaaactcggccgcgtcaagctcacg
ttcccgtggctggacaaggagttcacgagcacctgggcgcgcacggtccagccgggggcg
ggcaaggaccgcggcgcgctggtgctgcccgaagtcggggacgaggtcctggtgggcttc
gaacacggcgacttcgaagcgccctacgtgctcggcggcctctacaacagcaaggacacc
gcgccgtcgaagttcaccaaggcggtcgtcgacggcaacagcggggaggtggcgttgcgc
gggttcgtctcgcggaagggccacaagctcgaattcgccgaggacgacgggatcatcctg
tcctccggggacgcgaagttcgtggtcaagatcgaccagaagaaccaggtcatcgaggtg
accagcggcaagagcgtcacggtcaaggcgcagaacggcgtgagcatcgacgcgggcagc
gggccgctggagctcaagggccagaaggtgtccgtgaagtcccagaccgacgccagcatc
gaggcgagcagccagctgaagctgaacgggacggcgggtgtgaaggtcgagggcgccacc
gtttcggtcgccggccagggccagacggagctgaccgccagcggtgtcgtcaccgtgcgc
ggcagcgtggtcaagatcaactga
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