Amycolatopsis mediterranei U32: AMED_4954
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Entry
AMED_4954 CDS
T01269
Name
(GenBank) conserved hypothetical protein
KO
K21473
peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
Organism
amd
Amycolatopsis mediterranei U32
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amd01002
]
AMED_4954
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amd01011
]
AMED_4954
Peptidases and inhibitors [BR:
amd01002
]
Cysteine peptidases
Family C40
AMED_4954
Peptidoglycan biosynthesis and degradation proteins [BR:
amd01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
AMED_4954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
CENP-Q
Motif
Other DBs
NCBI-ProteinID:
ADJ46720
UniProt:
A0A0H3D6T8
LinkDB
All DBs
Position
complement(5475912..5477231)
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AA seq
439 aa
AA seq
DB search
MPRVRRGLSVSTLTLVILFGAGGTGLAAPPPPPNPSDSEIQAGKADANAKAGEVGRLTNQ
LAQAEQKLTQLQDDVELKQEQANKALVDLQTAQDDAAQAENDAKAARTEADAAAAAIDQA
RADLKTFAAASFQQGSTVGSLSAYLSADSPKNMLARAQLLDAVGGDRLNALDRLQQAQTE
KSNKDAAARKAAEIAQQKQDAARRAKNSADAAQTTAERAQDGQAAQNSQLEKNKSDVEQQ
LYAAQAKVSGLQGQRQRYQDWLAQKQREDEERARQAALAAATAGGGGRPSGGPAPSGPAG
SSIEAVIARALSTLGLPYAWGGGNTSGATRGIRDGGVADRYGDYNKIGFDCSGLMIYAFA
GVRSLPHYSGYQYSSGRQVPLSQMRRGDLLFWGGPGGIHHVALYLGGGQMVEAPQSGLRV
RVAPVRYGGIMPYATRLVG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcgcgtccgccggggactcagcgtgagcacgctcacgctggtgatcttgttcggc
gcgggtggcacgggcctcgcggcgcccccgccgccgccgaaccccagcgattcggagatc
caggccggcaaggccgacgcgaacgcgaaggccggcgaggtcggccggctgaccaaccag
ctggcccaggccgagcagaaactcacgcagctgcaggacgacgtcgagctcaagcaggaa
caggccaacaaggcgctggtcgacctgcagaccgcgcaggacgacgcggcgcaggcggag
aacgacgcgaaggccgcccgcaccgaagccgacgcggccgcggcggccatcgaccaggcc
cgggcggacctgaagaccttcgccgccgccagcttccagcagggcagcacggtcggctcg
ctctcggcgtacctgagcgcggacagccccaagaacatgctcgcccgcgcgcagctgctc
gacgccgtcggcggcgaccggctcaacgccctcgaccggctccagcaggcgcagaccgag
aagtccaacaaggacgccgccgcccgcaaggccgccgagatcgcccagcagaagcaggac
gcggcccgccgggcgaagaacagcgccgacgccgcgcagaccaccgccgaacgcgcccag
gacggccaggcagcccagaactcgcagctcgagaagaacaagtccgacgtcgagcagcag
ctctacgccgcccaggccaaggtcagcggcctgcagggccagcggcagcgctaccaggac
tggctcgcccagaagcagcgcgaggacgaggaacgcgcgcgccaggccgcgctcgccgcc
gccacggccgggggcggtggccgtccgtcgggcggcccggcgccgtcggggccggccggc
tcgtcgatcgaggcggtgatcgcgcgggcgctgtccacgctcgggctgccctacgcctgg
ggcggcggcaacacgagcggcgcgacccgcggcatccgcgacggcggcgtcgccgaccgc
tacggcgactacaacaagatcggcttcgactgctccggcctgatgatctacgccttcgcc
ggggtccgctcgctgccgcactacagcggttaccagtactcgtcgggacggcaggtgccg
ctgtcccagatgcgccgcggcgacctgctgttctggggtgggcccggcggcatccaccac
gttgcgctctacctcggcggcgggcagatggtcgaggcgccgcagtccggcctgcgggtc
cgggtcgccccggtgcgctacggcgggatcatgccgtacgcgacgcggctggtcggctga
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