Amycolatopsis mediterranei U32: AMED_4972
Help
Entry
AMED_4972 CDS
T01269
Name
(GenBank) TetR family transcriptional regulator
KO
K21962
TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
Organism
amd
Amycolatopsis mediterranei U32
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amd03000
]
AMED_4972
Transcription factors [BR:
amd03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
AMED_4972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_6
TetR_C_13
Motif
Other DBs
NCBI-ProteinID:
ADJ46738
UniProt:
A0A0H3D9I4
LinkDB
All DBs
Position
5496189..5496770
Genome browser
AA seq
193 aa
AA seq
DB search
MPRVSQDHLDARRRQILDGSRVCFARYGYEGATVRRLEEATGLSRGAIFHHFRDKESLFL
ALAEDDALRMADVVAEQGLVQVMRDLLAGGDHPADWLGTRLEVSRRLRTDPEFRARWAER
SEQLTTATRLRLLRQREAGNLRDDVDVDVLTAFLELVLEGLVSHLAMGLPAAGLGPVLDL
VEETVRRHRPGAA
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcgtaagccaggatcacctcgacgcacgccggcgccagatcctcgacggctcg
cgagtctgcttcgcgcgctacggctatgaaggtgccacagtccggcgcctggaggaagcc
accggtctctcccgcggggccatcttccaccacttccgggacaaggagtcgctcttcctc
gccctcgccgaggacgacgccctccggatggccgacgtcgtcgccgaacaggggcttgtc
caggtgatgcgcgacctgctggccggcggggaccacccggccgactggctcgggacgcgc
ctggaggtgtcccggcggctgcgcaccgatcccgagttccgcgcccgctgggccgaacgg
tccgagcagctcaccaccgccacccggctgcggctgctgcggcagcgggaggccgggaac
ctgcgcgacgacgtcgacgtcgacgtcctgaccgcgttcctcgagctcgtcctcgaagga
ctcgtctcgcacctggccatgggactgcccgccgccgggctggggccggtgctcgacctc
gtcgaagaaaccgtgcggcggcaccggcccggcgccgcctga
DBGET
integrated database retrieval system
