Entry |
|
Symbol |
sigB
|
Name |
(GenBank) RNA polymerase sigma factor
|
KO |
K03090 | RNA polymerase sigma-B factor |
|
Organism |
amd Amycolatopsis mediterranei U32
|
Brite |
KEGG Orthology (KO) [BR:amd00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:amd03021]
AMED_5213 (sigB)
Transcription machinery [BR:amd03021]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMED_5213 (sigB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
5781690..5782481
|
AA seq |
263 aa
MSSERKTLLHRPDEYAHCEPLFQELGSLDTADPRRDVVRSKLVTELLPLAEHIATRFSGR
GEPREDLVQVARIGLINAVDRFDPARGHDFLSFAVPTIMGEVRRHFRDTGWSVRVPRRLK
ELHLSLSQGSAVLSQRLGRAPTPTELAEHLNLDVDEVREGLLAGNAYQALSVDKPVHDDA
EALSLADTMGEPDHEMAMVENHEALQPLLQELPKRERAILVMRFFGGLTQTQIADRVGIS
QMHVSRLLSQTLEQLRGKLTGEG |
NT seq |
792 nt +upstreamnt +downstreamnt
gtgagcagcgagcggaaaaccctcctccaccgcccggacgaatacgcccactgcgaaccg
ctgttccaggaactgggcagcctcgacaccgctgatccgcgccgggacgtcgtccggagc
aagctcgtcaccgagctgctcccgctggccgagcacatcgcgacccggttctccggccgc
ggcgagccccgcgaagacctggtccaggtggcgcggatcggcctgatcaacgccgtcgac
cggttcgaccccgcccgggggcacgacttcctgtccttcgcggtgccgaccatcatgggc
gaggtccgccggcacttccgcgacaccggctggtccgtccgggtgccccggcggctcaag
gagctgcacctttcgctgagccagggctcggcggtgctctcccagcgcctgggccgtgcc
ccgacgccgaccgagctggccgagcacctgaacctcgacgtcgacgaggtccgcgaaggt
ctgctcgcgggcaacgcctaccaggcgctctcggtcgacaagccggtgcacgacgacgcc
gaggcgttgtcgctggccgacaccatgggggaaccggaccacgagatggccatggtcgag
aaccacgaggccctccagccgctgctgcaggaactgccgaagcgcgaacgcgcgatcctg
gtgatgcggttcttcggcgggctcacgcagacccagatcgccgaccgcgtcgggatctcc
cagatgcacgtctcccggctgctgtcgcagaccctggagcagctgcgcgggaagctcacg
ggcgagggctag |