Amycolatopsis mediterranei U32: AMED_5266
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Entry
AMED_5266 CDS
T01269
Name
(GenBank) DNA end-binding protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AMED_5266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amd03400
]
AMED_5266
DNA repair and recombination proteins [BR:
amd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AMED_5266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF1840
Motif
Other DBs
NCBI-ProteinID:
ADJ47028
UniProt:
A0A0H3DAC3
LinkDB
All DBs
Position
complement(5841567..5842433)
Genome browser
AA seq
288 aa
AA seq
DB search
MRAMWKGSVSFGLVSIPIQMYAATENKNVSLRQVHEADGGRIQYKRFCTIDGQEVPYAEI
AKGYELPDGEMVVITDAEMAELPLSTQRTIDVLEFVPLESIDPIQYDRTYYLEPQKNAVK
PYVVLRDALHKSSQVAIAKVAVRQRESMAVLRVHADVLVMTTILWPDEVREPDFPFLRDD
PPQIRPQELTMAGSLIDSLAEPVFEPEKYHDHYREALEEMIEAKVAGDETTKPAAVTAKA
DVVDLMAALQASVDAAKKSRQSSSEASEEDAEPAKKKPAARKRAPKPA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgatgtggaagggctcggtgtccttcgggctggtcagcattccgatccagatg
tacgcggccaccgagaacaagaacgtctccctgcgccaggtgcacgaggccgacggcggc
cgcatccagtacaagcggttctgcacgatcgacggccaggaagtgccctacgccgagatc
gccaagggctacgagctgcccgacggcgagatggtggtgatcaccgacgcggagatggcg
gagctgccgctgtccacccagcgcacgatcgacgtgctggagttcgtgccgctcgagtcg
atcgacccgatccagtacgaccggacctactacctggagccgcagaagaacgcggtcaag
ccgtacgtcgtgctgcgggacgcgctgcacaagtcgagccaggtggccatcgcgaaggtc
gcggtccggcagcgggagagcatggcggtgctgcgcgtgcacgccgacgtgctggtgatg
acgacgatcctgtggccggacgaggtccgcgagcccgacttcccgttcctgcgcgacgac
ccgccgcagatccggccccaggagctcaccatggccggatcgctgatcgactcgctggcc
gagccggtgttcgagccggagaagtaccacgaccactaccgcgaggccctggaagagatg
atcgaggccaaggtcgccggcgacgagacgaccaagcccgcggcggtcaccgccaaggcc
gacgtcgtcgacctgatggcggccctgcaggccagtgtggacgccgcgaagaagtctcgt
cagtcctcttcggaggcgtccgaagaggacgccgaaccggcgaagaagaagccggcggcc
cgcaagcgggcgccgaagcccgcctga
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