KEGG   Amycolatopsis mediterranei U32: AMED_5300
Entry
AMED_5300         CDS       T01269                                 
Symbol
ruvA
Name
(GenBank) holliday junction DNA helicase RuvA
  KO
K03550  holliday junction DNA helicase RuvA
Organism
amd  Amycolatopsis mediterranei U32
Pathway
amd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:amd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AMED_5300 (ruvA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amd03400]
    AMED_5300 (ruvA)
DNA repair and recombination proteins [BR:amd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AMED_5300 (ruvA)
    RecFOR pathway proteins
     AMED_5300 (ruvA)
SSDB
Motif
Pfam: RuvA_N HHH_5 RuvA_C RecR_HhH HHH IMS_HHH UBA_7 UBA_DHX29 DUF6052
Other DBs
NCBI-ProteinID: ADJ47062
UniProt: A0A0H3D9T4
LinkDB
Position
complement(5877810..5878406)
AA seq 198 aa
MISSVRGEVLIVGLDHVVVEVGGVGFAVQATPATLATLRRGEEARLHTALVVREDSLTLF
GFADADARELFGLLQTVSGIGPRLALATLAVLDPGKLRAALVEGNITVLTSVPGIGRKGA
ERLTLELRDKVTALAGTGDVPAVTAPGALRAEVVEALAGLGFPAKQAEQAVDKVLADGDG
HTTAGVLRAALATLGRKR
NT seq 597 nt   +upstreamnt  +downstreamnt
atgatctcgtcggtacgcggagaagtcctcatcgtcggcctcgaccacgtcgtggtcgag
gtcggcggggtcggcttcgccgtgcaggccaccccggcgacgctggcgaccctgcgccgc
ggcgaagaggcccggttgcacaccgcgctggtcgtccgcgaggactcgctgacgttgttc
ggcttcgccgacgccgacgcgcgcgagctgttcgggctgctgcagacggtgtccgggatc
gggccgcggctcgcgctggccacccttgccgtgctcgaccccggcaagctgcgggccgcg
ctggtcgaaggcaacatcaccgtgctgacctcggtgccgggcatcggccgcaagggcgcc
gaacggctcaccctcgaactgcgcgacaaggtcaccgcgctcgccggcaccggcgacgtg
ccggccgtcaccgcccccggcgccctgcgtgccgaggtcgtcgaggcgctggccgggctc
gggttcccggccaagcaggccgagcaggccgtggacaaggtcctggccgacggcgacggc
cacaccacggccggcgtgctgcgcgccgcgctggccaccctcggccgcaagcggtag

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