Amycolatopsis mediterranei U32: AMED_5314
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Entry
AMED_5314 CDS
T01269
Symbol
pdxS
Name
(GenBank) pyridoxine biosynthesis protein
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00750
Vitamin B6 metabolism
amd01100
Metabolic pathways
amd01240
Biosynthesis of cofactors
Module
amd_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
AMED_5314 (pdxS)
Enzymes [BR:
amd01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
AMED_5314 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NMO
NanE
IGPS
DHO_dh
Glu_synthase
TetR_C_27
Motif
Other DBs
NCBI-ProteinID:
ADJ47076
UniProt:
A0A0H3D8V6
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Position
complement(5889591..5890532)
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AA seq
313 aa
AA seq
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MSKGLVVSEQQPTPSTGTVQSVTGTAKVKRGMAEMLKGGVIMDVVTAEQAKIAEDAGAVA
VMALERVPADIRAQGGVARMSDPDLIDGIIETVSIPVMAKARIGHFVEAQVLQSLGVDYV
DESEVLTPADYANHIDKWAFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSNAT
THMRQIRQEIRRLTSLPEDELFVAAKELQAPYELVREVAQAGKLPVVLFTAGGIATPADA
AMMMQLGAEGVFVGSGIFKSGNPAQRAEAIVKATTFYDDPDVLAKVSRGLGEAMVGINVE
ELPEPHRLAERGW
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaaaggcctcgtcgtgtccgagcagcagcccaccccctccaccggtaccgtccag
tccgtcaccggcaccgccaaggtgaagcgcggcatggccgagatgctcaagggcggcgtg
atcatggacgtggtcaccgccgagcaggcgaagatcgccgaagacgccggcgcggtcgcg
gtgatggcgctggagcgcgtgcccgccgacatccgcgcccagggcggcgtcgcccggatg
agcgaccccgacctgatcgacggcatcatcgagaccgtctcgatcccggtgatggcgaag
gcccgcatcggccacttcgtcgaggcgcaggtcctgcagtccctcggcgtggactacgtc
gacgagtccgaggtcctcaccccggccgactacgccaaccacatcgacaagtgggccttc
accgtccccttcgtctgcggcgcgaccaacctcggcgaggcgctgcggcggatcaccgag
ggcgcggcgatgatccgctcgaagggcgaggccggcaccggcgacgtctccaacgccacc
acccacatgcggcagatccggcaggagatccggcggctgacctcgctgccggaggacgag
ttgttcgtcgcggccaaggaactgcaggcgccgtacgagctggtgcgcgaggtggcacag
gccgggaagctgccggtggtgctgttcaccgcgggcggcatcgcgaccccggccgacgcg
gcgatgatgatgcagctcggcgccgagggcgtgttcgtcggctcgggcatcttcaagtcc
ggcaacccggcccagcgcgccgaggcgatcgtcaaggcgacgacgttctacgacgacccg
gacgtcctcgccaaggtctcccgcggcctgggcgaggcgatggtcggcatcaacgtcgag
gagctgccggagccgcaccgcctcgccgagcgcggctggtaa
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