Amycolatopsis mediterranei U32: AMED_5391
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Entry
AMED_5391 CDS
T01269
Name
(GenBank) RHS repeat-containing protein
Organism
amd
Amycolatopsis mediterranei U32
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
DUF7370
SLT
DUF6613
Motif
Other DBs
NCBI-ProteinID:
ADJ47151
UniProt:
A0A0H3D930
LinkDB
All DBs
Position
complement(5973910..5980386)
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AA seq
2158 aa
AA seq
DB search
MSVVALTAGVVSPVPALASPAARPGPAAPAKPADFGSNAANSADIAVDGWGDAQGYHLEA
GRESSGFAWREAALIHPAGFDDSSWTGYQCLSGDGRFAALAILPASAVNIQDARDHGAFA
YSVDLASGTVHALAGGVGLKYYSPGCGAGDEAVFTVAIDQQTKLLTADLAAGKITGSVTA
PGQITSAVPTRTGIVGAAGNRLVSVPAMGSPAVIASVTGAVYDVRPSADGGVSFLHTAPG
AKVATAAHEHGGAVTTLGTGDLTRVQLSQGRAGHAILSGATAADAGVLAAAGITAVGDTP
LARGASTASLDGDALLGPDADGQKTTTAVLATKTGKVFSPAVPPSSARAATAVPTYSAAP
GTTGQSPHANRLSPKADAAPAANAAPNTTQAQSPKCAVPPLNANRQVMQPNPAQVNWAVQ
LAEQGLLTGSAYTRPANFANMGLVGYAPNSDFPLIPLSHPSGGTNTVPRSIFEGIMAQES
NWSQASWHAPAGTAGDPLIASYYGAGGDIVSINYAASDCGYGISQVTDGMHIGDHSLSEH
GQWKVAVDYQENIAAGLQILESTWNQLYADGITANNADPRYLENWYFAAWAYNSGIQPNA
ANGNTTGCTPGPSCTGPHGTWGLGWTNNPANLDYPPNRDPYLQDTYADAAHPASWPYQER
VLGWTASPLIRYGSPAYPKPTYNGGQHWVQPAPYTAMCALSANQCDPNATNTSNPGASHC
MLDDFQCWWHNPVTWIPTCATTCATSPYAVSGGSEPANPTQNPPTCGQDTSKVPSGSIIV
DDEPNRLNLQGCGSANWSDNGTFSYTYGTSSAGDPIGAIDTHQLGTGLGGRVLFSHTENG
SNPALINTGVWTPNLPSLQYYKVKLHLPGLGAQATNVVYNINPGGGVSPWKIRVNQAWNS
EQWVTIGTFAMQNGGNVTLTNNGSSVDQGGFGYSDFDVAFDAVAFVPQGGTPGQPIGGPV
GVIDAPRGSNPAFIACGCARRTAGDPVDTSTGYFGQEFTDLTTPGRGMPLSFTRSYAEGI
ADPNGPNGSLAVDGPFGRGWTDSYNLNATTAANGNVTITQEDGSQVAFVDSSGTYTTAVP
RFDAVLAKSGSSYVYTRRGQEIFTFDAAGGRLTAETDLAGSKANPPYQTSLAYDGGGHLS
TVTDPAGRQYTLTWTGAHVTGLADTAGRTVSYVYDTDGDLTDVIDVGGGHSQYSYNSAHL
MTAMRSPRNYGGAAGAVTSMVYDSAERVTSQTDPNGHTTTFGYQSGGQVLVTDPAGHRTL
DTYQNGLLVSETKGYGTPDAGTSSYTYDPVTLGVTTSTDPDGKVQTFTYDDHGNKTSASN
ALGSTTNFAYDTNDDLVETIDPNGVATVTTYDPNTLQPASTTVTQANNVVESTTGNFGPA
PTRTAKSFYDDAAHPADLTRSVDANGKTTTTTYDAFGDKSTVTDPAGDKTQYGFDTATGW
TTSVTQASGKTTTFDRDPFGSVTKTTDPLGHVTSATYDADGNKTSTTDGNGRVTGYAYDP
AGRMVKVTQADNTTQVADYNPDGTVSGFTDGLGGKTGYGYDGQGRRTVRTDPGNRATTTH
LDAAGRISSVTDAAGRSTGFGYDDAGRPTSETFSDGVTPNVGYTYDQVGQRLSMTDGTGK
STWAYDTFGEIVAQTQGSGASVSFGYDSAGNQTSITYPGHATPVARTFDNAERLKTVTDW
DGNTTTFGYTPDGQVASTAYPDGVTVANSYDDNDLLTGTTAGPALSASYGRDPVGQASSR
TVSGVTQNFGYSPREQLTSAGSTGFAYDAAGNPVTVGGTTQTFDAAGQLTADTFDVLGER
TKAGTTTYGYNQAGQLTSYTGANSAAYAYNGDGMRTGKTVGGVTTTFVWDSAPTQNLLSD
GVNSYLYGPGGLPIEQIGAASFWFVHDQVGSTIGLLDSTGAVAATYSYSPYGTVTATGSA
GTPLRYTGQYTDAESGLVYLRARYYDPATALFLTLDPMVDTTRAPYAYAGDNPVNYTDPT
GKCSFWSCLGAGLMVAGIAAAAVGCFVLEPCGGLALAGAGAVSAGAGMTMFGIGAVSAAA
GAAMVASGGSGPNWDFDDSGDGDAGPSKRQQSQDDAHHPDNMDHVFRPKRNDHKLGPLVD
SCGSEDQAMTDMIDSIGDVPDGIYGKGNEIERMVNGHLVHIRGRMMDGVFKIGTAYTP
NT seq
6477 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgtggtcgccctgacggccggcgtggtttcgcccgtaccggcgctggcgtcgccc
gccgcgaggcctggtcccgcggcgccggcgaaaccggccgacttcggttcgaacgcggcg
aactccgcggacatcgccgtcgacggatggggtgacgcgcagggctaccacctcgaagcc
ggccgggagagcagcgggttcgcctggcgtgaagccgcgctgatccatcccgccggtttc
gacgactcctcctggaccggctaccaatgcctttccggcgacggccggttcgccgcgctg
gccatcctgcccgcttccgcggtgaacatccaggacgcccgcgaccacggggccttcgcc
tactccgtcgacctcgcctccggcacggtgcacgcgctcgccggcggcgtcgggctgaag
tactactcgcccggctgcggggccggggacgaggccgtgttcaccgtcgcgatcgaccag
cagaccaagctgctgaccgcggacctcgccgcggggaagatcaccggctcggtcaccgcg
cccgggcagatcacttcggccgtgcccacccggaccggcatcgtcggtgccgcgggcaac
cggctggtttccgtgcccgcgatgggaagcccggccgtcatcgcctccgtcaccggtgcg
gtgtacgacgttcgcccctcggccgacggcggcgtgagcttcctgcacaccgcacccggc
gccaaggtcgcgaccgcggcccacgagcacggcggtgccgtcacgaccctcggcaccggt
gacctcacccgcgtgcagctgtcccagggtcgcgccgggcacgccatcctgtccggcgcc
accgcggccgacgccggggtgctggccgcggccggcatcacggcggtcggggacacccct
ctcgcccggggagcttcgacggcatcgctcgacggtgacgcgcttctcgggccggacgcc
gatgggcagaaaaccaccaccgccgtgctggcgacgaagacgggcaaagtcttctcgccg
gccgtcccgccgagctccgcccgggccgccacggcggtccccacgtactcggcggctccg
ggaaccacggggcagtcaccgcacgcgaaccgcctgagcccgaaggccgacgcggctccg
gcggccaacgccgcgccgaacaccacgcaggcgcagtcgccgaagtgcgcggtgccgccg
ctgaacgccaaccgccaggtcatgcagccgaacccggcgcaggtcaactgggcggtgcag
ctggccgagcagggcctgctgaccggcagcgcgtacacgcgcccggcgaacttcgcgaac
atgggactcgtcgggtacgcacccaacagcgacttcccgctgatcccgctctcgcacccg
tccgggggcacgaacaccgtgccgcggtcgatcttcgagggcatcatggcccaggagtcg
aactggtcccaggcgtcgtggcacgccccggccggcaccgcgggcgacccgctgatcgcc
agctactacggcgccggcggcgacatcgtctccatcaactacgccgcttccgactgcggg
tacgggatcagccaggtcaccgacggcatgcacatcggtgaccactccctgtccgagcac
ggtcagtggaaggtcgcggtcgactaccaggagaacatcgccgccggcctgcagatcctg
gagagcacctggaaccagctgtacgcggacgggatcaccgcgaacaacgccgacccgcgc
tacctggagaactggtacttcgcggcctgggcgtacaactccggcatccagccgaacgcg
gccaacggcaacaccaccggctgcacgcccgggccgtcctgcaccggcccgcacggcacc
tggggcctgggctggacgaacaacccggccaacctcgattacccgcccaaccgcgacccg
tacctgcaggacacctacgccgacgcggcccacccggcgagctggccgtaccaggagcgt
gtgctgggctggaccgcgagcccgctgatccgctacggcagcccggcctacccgaaaccg
acgtacaacggcggccagcactgggtccagcccgcgccgtacaccgcgatgtgcgccctg
tcggccaaccagtgcgaccccaacgccaccaacacgtccaaccccggcgccagccactgc
atgctcgacgacttccagtgctggtggcacaacccggtgacgtggatccccacctgcgcc
acgacgtgcgcgacgagcccgtacgcggtgtcgggcgggtccgaaccggcgaacccgacg
cagaacccgccgacgtgcggccaggacacctcgaaggtgcccagcggttcgatcatcgtc
gacgacgagccgaaccggctcaacctgcagggctgcgggtcggcgaactggtcggacaac
ggcacgttcagctacacctacggcaccagctccgccggcgacccgatcggcgcgatcgac
acccaccagctcggtaccggcctcggcggccgcgtcctgttctcccacaccgagaacggc
tcgaacccggcgctcatcaacaccggggtgtggacgccgaacctgccttccctgcagtac
tacaaggtcaagctgcacctgcccggcctcggcgcccaggcgaccaacgtcgtctacaac
atcaaccccggcggcggggtctccccgtggaagatccgggtcaaccaggcctggaactcc
gagcagtgggtcaccatcggcacgttcgccatgcagaacggcggcaacgtcaccctgacc
aacaacggcagttcggtcgaccagggcggcttcggctactccgacttcgacgtggccttc
gacgcggtcgcgttcgtgccgcagggcggcacgccgggccagccgatcggcggcccggtg
ggcgtcatcgacgccccacggggatccaacccggccttcattgcctgcggctgcgcgcgg
cggaccgcgggtgacccggtcgacacgtccaccggctacttcggccaggagttcaccgac
ctgacgacgccgggtcgcggcatgccgctcagcttcacccgcagctacgccgagggcatc
gcggatcccaacggccccaacggatccctcgccgtcgacgggcccttcggccgcggctgg
acggactcgtacaacctcaacgcgaccaccgccgcgaacggcaacgtgacgatcacgcag
gaggacggctcccaggtcgccttcgtcgactcgtccggtacgtacacgacggccgtcccg
cgcttcgacgccgtgctggcgaagagcggctccagctacgtctacacccggcgcggccag
gagatcttcaccttcgacgccgccggcggccggctcaccgcggagacggacctcgccggc
agcaaggcgaacccgccgtaccagaccagcctggcctacgacggcggcggccacctgtcg
accgtcaccgacccggccggccgccagtacacgctgacctggaccggtgctcatgtcacc
ggtctggccgacaccgccggacgcacggtctcgtacgtctacgacaccgacggcgacctc
accgacgtcatcgacgtgggcggcgggcattcccagtacagctacaactccgcgcacctg
atgaccgccatgcgctcgcccaggaactacggcggggcggcgggcgcggtcacgtcgatg
gtctacgacagcgccgagcgcgtcaccagccagaccgacccgaacggccacaccaccacc
ttcggctaccagtccgggggccaggtgctggtcaccgacccggccggccaccggacactg
gacacctaccagaacggcctgctggtctcggagaccaagggctacggcacgcccgacgcg
ggcaccagcagctacacctacgacccggtgacgctgggcgtgacgacttccaccgacccc
gacggcaaggtccagacgttcacctacgacgaccacggcaacaagacgtcggcgtcgaac
gcgctcgggtccaccaccaacttcgcctacgacaccaacgacgacctggtcgagacgatc
gaccccaacggcgtcgccacggtcaccacctacgacccgaacacgctgcagccggcctcc
accaccgtcacccaggccaacaacgtcgtcgagtccaccaccggcaacttcgggcccgca
cccacccgcaccgcgaagtcgttctacgacgacgcagcgcacccggccgacctgacccgg
tccgtggacgccaacggcaagaccaccaccacgacctacgacgccttcggcgacaagtcg
acagtcaccgacccggccggcgacaagacccagtacggcttcgacaccgccaccggctgg
acgacctcggtcacccaggcgagcggcaagaccaccaccttcgaccgggacccgttcggc
tcggtcaccaagaccaccgacccgctcgggcacgtgacctcggcgacctacgacgccgac
gggaacaagacgtccacaacggacggcaacggccgggtcaccggctacgcctacgatccg
gccggccggatggtgaaggtcacccaagccgacaacaccacgcaggtcgccgactacaac
cccgacggcaccgtttccggcttcaccgacggcctcggcggcaagaccggctacggctac
gacggccaggggcgccgcaccgtgcgcaccgaccccggcaaccgggccaccacaacgcac
ctggacgcggcaggccggatctcctcggtgaccgacgccgccggtcgcagtaccggcttc
ggctacgacgacgccggccggcccacctcggaaaccttctccgacggcgtgacgccgaac
gtcggctacacctacgaccaggtcgggcaacggctgtccatgaccgacggcaccggcaag
tcgacctgggcgtacgacaccttcggcgagatcgtggcgcagacgcagggctccggcgcg
agcgtgtccttcggctacgacagtgccggcaaccagacgtcgatcacctatcccggccac
gccacgccggtggcccggacgttcgacaacgccgagcggctgaagaccgtcaccgactgg
gacggcaacacgaccaccttcggctacaccccggacggccaggtcgcgagcaccgcctac
ccggacggcgtcaccgtcgcgaactcctacgacgacaacgatctgctgaccgggaccacg
gccggtccggccctgtcggcgagctacgggcgggacccggtcggccaggcctcgtcccgc
acggtctccggtgtgacgcagaacttcggctattcaccgcgggagcagctcacctcggcc
gggtcgaccgggttcgcctacgacgccgccggcaacccggtcaccgtcggcgggacgacc
cagaccttcgacgcggccggccagctcaccgccgacacgttcgacgtgctgggggagcgg
accaaggccggtaccacgacctacggctacaaccaggccgggcagctcacgtcgtacacc
ggggcgaactccgccgcctacgcctacaacggcgacgggatgcggaccggcaagaccgtc
ggtggggtcacgacgaccttcgtgtgggacagcgccccgacgcagaacctcctgtccgac
ggggtgaacagctacctgtacgggccgggcgggctgcccatcgagcagatcggcgccgcg
agtttctggttcgtgcacgaccaggtcggctccaccatcgggctgctcgactcgaccggc
gcggtggccgcgacctactcctacagtccgtacggaacggtcacggcgaccggcagcgcc
ggcaccccgctgcgctacaccggccagtacaccgacgccgagtcgggcctggtgtacctg
cgagcccgctactacgaccccgcgacggcgttgttcctgacgctggacccgatggtcgac
accacccgggcgccgtacgcctacgccggcgacaacccggtcaactacaccgaccccacc
ggcaagtgcagcttctggagctgcctcggcgcgggactgatggtcgccggcatcgccgcg
gcggcggtcggctgcttcgtgctggagccgtgcggcggcctggcgctggccggggccggg
gccgtgtcggcgggcgcgggcatgaccatgttcgggatcggtgcggtgtcggcggcggcg
ggcgcggcgatggtcgcctccggcggttccgggccgaactgggacttcgacgattcgggt
gacggagacgccggtccgtccaaacggcagcagtcacaggacgacgcgcaccatccggac
aacatggaccacgtgttccggccgaagcgcaacgaccacaagctggggccgttggtcgac
agctgcggcagcgaggaccaggcgatgaccgacatgatcgacagcatcggtgacgtgccg
gacggcatctacggcaagggcaacgagatcgagcgtatggtgaacgggcacttggtgcac
atcaggggcaggatgatggacggcgtcttcaagatcggaacggcttacaccccatga
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