Amycolatopsis mediterranei U32: AMED_5774
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Entry
AMED_5774 CDS
T01269
Name
(GenBank) alpha-L-rhamnosidase
Organism
amd
Amycolatopsis mediterranei U32
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Paralog
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Motif
Pfam:
Bac_rhamnosid_C
Bac_rhamnosid6H
MGH1-like_GH
Glyco_hydro_76
Motif
Other DBs
NCBI-ProteinID:
ADJ47523
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Position
6384941..6387121
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AA seq
726 aa
AA seq
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MLAAITPVLATTPGQAAQGLGNAACKSYVLGPSASDVHAVRAEGRGDVKHPQSLTSSHGP
ATTLTTVAGGTPASVLLDFGQEIGGTPYLEPTRVTGAPALTLVTSEARQYIRTPAATTVP
SAVPSGSTQVPLASAANLETGNTITFTAAGGTPVTRTITAFDTTARTATVTPPLSADLPA
GTAVKTSPGAPSSDESRGLAGVGGPDTFQPTAAGRLTGGFHGGFRFALLTVSTPGSVSLS
SLGVTFQAFRATTADYQGWFLSSDDQLNRMWYSGAYTLQMNLKAPGLNGLPDARIYDGAK
RDRSIWTGDLLVQIPTLLTSLGTAGAPYVKSSLDTLLATQRADGAFPGSPDFAKRTNPAG
SPLFYSNNYSGYGLRAFIDYYRYTGDKAYVTAVLPALRKELAYNDSFRNADNLVVSNDRD
YWQATQTGEVTKYSIDYSIVLREMSWLERAVGSAALADGYDTKADAIKTAVMSKLWNPAL
GAYGQSSAKPDVLVEDANALALQYGFVPAGQEAKVLAALKTLWTPYGAIMGPGLQDPTGH
TIEPFGNGMETAGRFAAGDTAGALDLVRRTWGPVVDPRNPLYTGAFWEFKNSTGGVNRAT
ASLAHGWAASPSVQLTEQLLGIKPVGAGYQTWSIAPNPGTVRSAAGAVPTAYGTIKTQWT
SDSRSGRFTLTVQAPAGTSGTITVPAGRGSVVTVNGRDSGPRAKSTGDSATLTVSGGSYQ
ITVSQG
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgctgccatcacccccgtcctcgccaccaccccaggtcaggccgcgcaagggctg
ggcaacgcggcctgcaagtcctacgtgctcgggccgtcggcgtccgacgtgcacgccgtg
cgggccgaaggccgcggcgacgtcaagcatccccagtccctgaccagctcccacgggccc
gcgacgactctcacgacggtggcgggcgggacgccggcctcggtgctgctggacttcggc
caagagatcggcggcaccccgtacctcgagccgacccgggtcaccggcgccccggccctc
accctggtcacctccgaagcccgccagtacatccgtaccccggccgcgacgacggtgccg
tccgcggtgcccagcgggtcgacccaggtccccctggcctccgcggccaacctcgagacc
ggcaacacgatcacgttcaccgccgcgggcggcaccccggtcacgcgcaccatcacggcc
ttcgacaccaccgcccgtaccgcgaccgtcacgcccccgttgtcggctgatctcccggcg
ggcacggccgtcaagacgtcgccaggcgcgccgagttcggacgaatcccgcggcctcgcg
ggtgtcggcggtccggacaccttccagcccaccgcggccggccggctgaccggcggtttc
cacggcggcttccggttcgcgctgctcaccgtttccactccgggcagcgtcagcctttcc
tcattgggggtgaccttccaggcgttccgcgcgaccacggccgactatcagggctggttc
ctctccagcgacgaccagctgaaccggatgtggtactccggcgcgtacaccctgcagatg
aacctcaaggcgccgggcctcaacgggctcccggacgcgcggatctacgacggcgccaag
cgcgaccggagcatctggaccggcgacctgctcgtccagatcccgaccctgctcaccagt
ctcggaaccgccggggcgccctacgtgaagtcgtcgctcgacaccttgctggcgacccag
cgggctgacggcgcgttccccggctcgccggacttcgccaagcgcaccaatcccgcgggc
tcgccactcttctactcgaacaactactcgggctacgggttgcgggcgttcatcgactac
taccgctacaccggggacaaggcctacgtcacggccgtgcttcccgcgctgcgcaaggaa
ctcgcgtacaacgacagcttccgcaacgcggacaacctcgtcgtgtccaacgaccgtgac
tactggcaggcgacccagaccggggaagtcaccaagtacagcatcgactactccatcgtc
ctgcgcgagatgtcctggctcgaacgcgccgtcggctccgcggcgctggccgacggctac
gacaccaaggccgacgccatcaagaccgcggtcatgagcaagctgtggaacccggcgctg
ggcgcgtacgggcagagcagcgccaaaccggacgtccttgtcgaggacgccaacgccctg
gcgctccagtacggcttcgtcccggccgggcaagaggcgaaggtcctcgccgcgctgaag
accctgtggacgccgtacggcgccatcatgggccccggcctgcaggacccgaccgggcac
accatcgagccgttcggcaacggcatggagacggccggccggttcgcggccggcgacacc
gccggagcgctggacctcgtgcgacgcacctggggtcccgtggtggacccgcggaacccg
ctctacaccggggctttctgggagttcaagaacagcaccggcggggtcaaccgggcgacg
gccagcctcgcgcacggctgggccgcgtcgccgtcggtccagctgaccgagcagctcctc
gggatcaagccggtcggcgccggctaccagacctggagcatcgcgccgaaccccggcacg
gtgcgctcggccgccggtgccgtcccgaccgcctacggaaccatcaagacgcagtggacc
agcgactcgcgctccggccggttcacgctcacggtgcaggcacccgccggcacctcgggc
accatcaccgtgccggcaggccgcggctcggtggtcaccgtcaacggtcgtgactccggg
ccccgggcgaagtcgaccggcgactccgcgaccttgaccgtctcgggcggctcgtaccag
atcaccgtttcccagggctga
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