Amycolatopsis mediterranei U32: AMED_6006
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Entry
AMED_6006 CDS
T01269
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
amd
Amycolatopsis mediterranei U32
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amd03009
]
AMED_6006
Enzymes [BR:
amd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
AMED_6006
Ribosome biogenesis [BR:
amd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AMED_6006
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
ADJ47747
UniProt:
A0A0H3DC17
LinkDB
All DBs
Position
complement(6655720..6656472)
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AA seq
250 aa
AA seq
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MTSSEHPDGVRLQKVLSQAGVASRRAAEDLIVAGRVEVDGEVVTELGRRVDPDAAIIHVD
GTRVNLRDDLIYLALNKPKGVHSTMSDDRGRPCVGDYLRGRYEETPGVVHVGRLDENTEG
LLLLTNDGDLGHRLMHPSYRVLKTYLAEVDGLVPRGLGKELRNGWELPDGIVKVDQFRVK
DMHSGKSLVELVIHEGKKHIVRRLLKDTGHPVLKLVRTAVGDVQLGNQRVGSIRRLTKTE
VGALYRNVEL
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgacatccagtgaacaccccgacggcgtccggctgcagaaggtgctgtcgcaagccggg
gtcgcctcccggcgcgcggcggaggacctgatcgtcgccggccgggtcgaggtggacggc
gaggtcgtcaccgagctgggccgccgcgtcgacccggacgccgcgatcatccacgtcgac
ggcacccgcgtgaacctgcgcgacgacctgatctacctcgccctgaacaagcccaagggc
gtgcactcgacgatgtcggacgaccgtggccgcccgtgcgtcggcgactacctgcgcggc
cgctacgaggagacgcccggcgtcgtgcacgtcggccggctcgacgagaacaccgagggc
ctgctgctgctgaccaacgacggcgacctcgggcaccggctgatgcacccgtcgtaccgg
gtgctcaagacctacctcgccgaggtcgacggcctcgtcccgcgcgggctcggcaaggag
ctgcgcaacggctgggagctgccggacggcatcgtcaaggtcgaccagttccgggtcaag
gacatgcactccggcaagtcgctggtggagctggtgatccacgagggcaagaagcacatc
gtgcgccgcctgctcaaggacaccgggcacccggtgctcaagctggtccgcaccgcggtc
ggcgacgtccagctcggcaaccagcgcgtcggctcgatccgccggctgacgaagaccgag
gtcggcgcgctctaccgcaacgtcgagctctga
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