Amycolatopsis mediterranei U32: AMED_6090
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Entry
AMED_6090 CDS
T01269
Symbol
fnr
Name
(GenBank) CRP/FNR family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd02020
Two-component system
amd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AMED_6090 (fnr)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMED_6090 (fnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amd03000
]
AMED_6090 (fnr)
Transcription factors [BR:
amd03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
AMED_6090 (fnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HTH_IclR
HTH_24
HTH_36
Crp
GntR
HTH_Cmi2_C
MarR
TrmB
Ribosomal_L29
HTH_28
HTH_20
HTH_CodY
HTH_23
MarR_2
Dimerisation
Sigma70_r4_2
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ADJ47829
UniProt:
A0A0H3DDX7
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All DBs
Position
complement(6745858..6746562)
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AA seq
234 aa
AA seq
DB search
MSGQDDTADGALLAHLADGDREYLLARGTRRRFRANAVVLMEGDPSDHVHVLVSGWVRVS
TILEDGREVLFGLRGPGEVLGDLAAVTGRPRSASVRAIEPCTVFQLTGPDFVDVLHARPT
IAVATIKTVAARLRNAESARVDSAAFDVSRRVAGVLVRLAEERGQTVPEGVVVDALSQED
IAAQIGAARRTVARALRVLRERGIVETGRRRFLIRELRVLRAFAHSEPNGTQHP
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcaagacgacacggcggacggggcactcctggcccacctcgccgacggcgat
cgcgaatacctgctcgcccggggcacccgccgccggttccgcgcgaacgccgtcgtgctc
atggagggcgacccgtccgaccacgtccacgtgctggtgtccggctgggtgcgcgtctcg
acgatcctcgaggacggccgcgaggtgctcttcgggctgcgtggtcccggcgaggtgctg
ggcgacctcgcggcggtcaccgggcgcccgcggtcggcgtcggtgcgcgcgatcgaaccc
tgcaccgtcttccagctcaccgggcccgacttcgtcgacgtcctgcacgcccggcccacg
atcgccgtcgcgaccatcaagacggtcgcggcccggctccgcaacgccgaatccgcccgg
gtcgactcggccgccttcgacgtcagccggcgcgtggcgggggtgttggtccggctggcc
gaggaacgcgggcagaccgtgccggagggcgtcgtcgtcgacgcgctgtcgcaggaggac
atcgccgcacagatcggcgcggcccggcgtaccgtcgcgcgggcgctgcgtgtgctgcgg
gagcgcggcatcgtcgagaccggccgccgccggttcctcatccgcgagctccgcgtcctg
cgggccttcgcccactctgagccaaacggcacacaacacccgtga
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