Amycolatopsis mediterranei U32: AMED_6127
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Entry
AMED_6127 CDS
T01269
Symbol
rpsA
Name
(GenBank) small subunit ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
AMED_6127 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
amd03011
]
AMED_6127 (rpsA)
Ribosome [BR:
amd03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
AMED_6127 (rpsA)
Bacteria
AMED_6127 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
DUF2110
SOGA1-2-like_CC
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ADJ47864
UniProt:
A0A0H3DE11
LinkDB
All DBs
Position
complement(6782934..6784433)
Genome browser
AA seq
499 aa
AA seq
DB search
MTTDTATAPTAPVGAPQVAINDIGSEEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLL
DIGYKTEGVIPSRELSIKHDVDPAEVVTVGDEVEALVLQKEDKEGRLILSKKRAQYERAW
GTIEELKEKDEPVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGRELEAKI
IELDKNRNNVVLSRRAYLEQTQSEVRSEFLNALAKGQVRKGVVSSIVNFGAFVDLGGVDG
LVHVSELSWKHIDHPSEVVEVGQEVTVEVLDVDMDRERVSLSLKATQEDPWRQFARTHAI
GQIVPGKVTKLVPFGAFVRVEEGIEGLVHISELAERHVEIPEQVVQVNGDVMVKVIDIDL
ERRRISLSLKQANEGVTPDTEFDPTQYGMAAEYDAEGNYIYPEGFDPDTQEWQEGFDKQR
EEWERQYAEAHTRYEAHMKQVQKAVEADAEAAADAATGIEGGAESYTSGSTATDTKSSGG
TLASDEQLAALREKLSGGA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgacaccgccaccgccccgaccgcccccgttggggccccgcaggtcgccatc
aacgacatcgggtcggaggaagatttcctcgcggctatcgacaagacgatcaagtacttc
aacgatggtgacatcgtcgaaggcacgatcgtcaaggtcgaccgcgacgaggtcctgctc
gacatcggctacaagaccgagggtgtcatcccctcgcgtgagctctccatcaagcacgat
gtcgacccggctgaggttgtcaccgtcggcgatgaggtcgaagccctggttctccagaag
gaggacaaggaaggccgtctgatcctgtccaagaagcgcgcgcagtacgagcgcgcctgg
ggcacgatcgaggagctcaaggagaaggacgagcccgtcaagggcaccgtcatcgaggtc
gtcaagggcggcctcatcctggacatcggcctgcgcggcttcctccccgcttccctggtc
gagatgcgccgcgtgcgcgacctgcagccgtacgtcggccgcgagctcgaggcgaagatc
atcgagctggacaagaaccgcaacaacgtggtcctgtcccgccgcgcctacctcgagcag
acccagtccgaggtgcgcagcgagttcctcaacgcgctcgccaagggccaggtccgcaag
ggcgtcgtgtcgtccatcgtcaacttcggtgccttcgtggacctgggtggcgtcgacggc
ctggtgcacgtctccgagctgtcctggaagcacatcgaccacccgtccgaggtcgtcgag
gtcggccaggaggtcacggtcgaggtcctggacgtcgacatggaccgcgagcgcgtctcg
ctgtcgctgaaggcgacccaggaagacccgtggcgccagttcgcccgcacccacgcgatc
ggtcagatcgtgccgggcaaggtcaccaagctggttccgttcggtgcgttcgtgcgcgtc
gaagagggcatcgagggtctggtccacatctcggagctggccgagcgccacgtcgagatc
ccggagcaggtcgtccaggtcaacggcgacgtcatggtcaaggtcatcgacatcgacctc
gagcgtcgtcgcatctcgctgtcgctgaagcaggcgaacgagggtgtcacgccggacacc
gagttcgacccgacccagtacggcatggccgccgagtacgacgccgagggcaactacatc
taccccgaaggcttcgacccggacacccaggagtggcaggaaggcttcgacaagcagcgt
gaggagtgggagcgccagtacgccgaggcgcacactcgttacgaggcccacatgaagcag
gtccagaaggccgtcgaggccgacgcggaagcggcggccgacgcggcgacgggcatcgag
ggtggcgcggaaagctacacctcgggctcgaccgcgaccgacacgaagagcagcggtggc
accctcgcctccgacgagcagctcgcggcgctccgcgagaagctctccggcggtgcgtga
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