Amycolatopsis mediterranei U32: AMED_6218
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Entry
AMED_6218 CDS
T01269
Name
(GenBank) TetR family transcriptional regulator
KO
K23778
TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
Organism
amd
Amycolatopsis mediterranei U32
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amd03000
]
AMED_6218
Transcription factors [BR:
amd03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
AMED_6218
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GFIT
Motif
Pfam:
TetR_C_31
TetR_N
TetR_C_6
EH_Signature
Motif
Other DBs
NCBI-ProteinID:
ADJ47953
UniProt:
A0A0H3DD23
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Position
complement(6872057..6872680)
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AA seq
207 aa
AA seq
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MTHSGARDRTGGRRPRRHDPGRRIRILDAALDVLVERGMTGMTHRHVAARADVPLGSVTY
HFAGLAELQAQAFARFVELQTAVFERLFDDVGTREEFVEVLVDLVHASPARQRSAVLGFE
LHLAALRDPGLRVLAEAWTRSSQEALARFVGAEAAARLDALLEGMIMHALLATGPRSREA
ARAAIDPAVERPGPDGFPRTQGEHHVR
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgacccactccggagcccgggaccggaccggcggccggcggccccgccggcatgatccc
ggccgccggatccgcattctcgacgcggcgctggatgtcctggtggagcgcgggatgacc
gggatgacgcaccggcacgtcgccgcccgggccgacgtgccgctcggttcggtcacctac
cacttcgccggcttggccgagctgcaggcgcaagcgttcgcgcggttcgtcgagctgcag
accgcggtgttcgagcggctcttcgacgacgtcgggacccgcgaggagttcgtcgaggtg
ctggtcgacctcgtccacgcgagcccggcccggcagcgcagtgcggtgctcgggttcgag
ctgcacctggcggccctgcgcgaccccgggctccgcgtgctggccgaggcgtggacgagg
agcagccaagaggcgctggcccgcttcgtcggcgcggaagccgccgcacgcctggacgcg
ctgctcgaagggatgatcatgcacgcactgctggcgaccggaccgcggtcccgggaggcg
gcccgggcggccatcgacccggctgtcgagcggcccggcccggacggctttccgcgaacg
caaggagaacaccatgtccgatag
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