Amycolatopsis mediterranei U32: AMED_6245
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Entry
AMED_6245 CDS
T01269
Symbol
iciA
Name
(GenBank) LysR family transcriptional regulator
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
amd
Amycolatopsis mediterranei U32
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amd03000
]
AMED_6245 (iciA)
03036 Chromosome and associated proteins [BR:
amd03036
]
AMED_6245 (iciA)
Transcription factors [BR:
amd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AMED_6245 (iciA)
Chromosome and associated proteins [BR:
amd03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
AMED_6245 (iciA)
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_AsnC-type
MarR_2
P22_Cro
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ADJ47980
UniProt:
A0A0H3DAE2
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Position
complement(6917857..6918753)
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AA seq
298 aa
AA seq
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MMTELPLDQVRTLLAVVDAGTFDAAAAGLHVTPSAVSQRVKALEQRTGSVLVTRTKPVRV
TDSGQVVVRFARRLAALERDARAELGMSGEPVRVPIAVNADSLSTWFLPALAGVTADPPI
CFELHREDQEHTTTLLREGRVMAAVTSSAAPVQGCSVRPLGDLRYLPLAAPAFAARWVTG
ALRDDLSAAPVVMFDDHDDLQDAFVRLLGGGGASALRHYVPASEMVVAAVEAGLGWGMVP
EVQAAPGLRAGTLVPLVRDRPVDVPLYWQQWKLDLPALSTVAEAVAAAAASSLRSPGS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgatgacggagctgccgctggatcaggtcaggacgctgctcgcggtggtcgacgcgggc
acgttcgacgccgccgcggcggggctgcacgtgacgccgtcggccgtgagccagcgggtg
aaggcgctcgaacagcgcaccggcagtgtgctggtgacccgcacgaaaccggtgcgggtc
accgactccgggcaggtcgtggtccggttcgcgcggcggctcgcggccctcgagcgggac
gcgcgggccgaactcggcatgagcggcgagcccgtgcgggtgccgatcgcggtcaacgcc
gattcgctgtccacctggttcctgccggcgctcgccggggtgaccgccgacccgccgatc
tgtttcgaactgcaccgcgaggaccaggagcacaccaccacgttgctgcgggagggccgg
gtgatggcggcggtgacgtcttcggccgctccggtgcagggctgctccgtgcgcccgctc
ggcgacctgcgctacctgccgctggccgcccccgccttcgcggcgcggtgggtgaccggc
gcgctgcgggacgacctgtccgcggcgccggtcgtgatgttcgacgaccacgacgatctg
caggacgccttcgtgcggctgctcggcgggggcggggcgagtgccttgcggcactacgtc
ccggcctcggagatggtcgtcgccgcggtcgaagccggcctcgggtggggcatggtgccc
gaggtgcaggcggcaccgggcctgcgggccggcacgctggtgccactcgtgcgggaccgg
ccggtggacgtgccgctctactggcaacagtggaaactggacctgcccgcactgtccaca
gtggccgaagcggtcgcggccgcggcggcgtcctcgttgcgcagccccggttcctga
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