Amycolatopsis mediterranei U32: AMED_6469
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Entry
AMED_6469 CDS
T01269
Symbol
gcdH
Name
(GenBank) glutaryl-CoA dehydrogenase
KO
K00252
glutaryl-CoA dehydrogenase [EC:
1.3.8.6
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00071
Fatty acid degradation
amd00310
Lysine degradation
amd00362
Benzoate degradation
amd00380
Tryptophan metabolism
amd01100
Metabolic pathways
amd01110
Biosynthesis of secondary metabolites
amd01120
Microbial metabolism in diverse environments
Module
amd_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
AMED_6469 (gcdH)
09105 Amino acid metabolism
00310 Lysine degradation
AMED_6469 (gcdH)
00380 Tryptophan metabolism
AMED_6469 (gcdH)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AMED_6469 (gcdH)
Enzymes [BR:
amd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.6 glutaryl-CoA dehydrogenase (ETF)
AMED_6469 (gcdH)
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Motif
Pfam:
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_N
Acyl-CoA_dh_2
ACOX_C_alpha1
Acyl-CoA_ox_N
Peptidase_C27
Motif
Other DBs
NCBI-ProteinID:
ADJ48200
UniProt:
A0A0H3DB06
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Position
7150657..7151823
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AA seq
388 aa
AA seq
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MDTTDFYALADDLPDEDRDLLTRLRGFLDSELAPVANWHWARERFPHHLVEPLGKLDVGG
LSYTGYGLPGRTSLLDGFVTLDLARTDPSFATFFGVHTGLAMGSIYLCGSEEQKAKWLPP
MHRFEKIGAFGLTEPDVGSAASRGLKTTARREGDEWVLNGEKKWIGNATFADVVVVWAKD
VEDGQVKGFLLEQGTPGFTPTKIEGKIALRSVQNAHILLEDCRVPEANRLQHANTFADTA
AVLRMTRTSVAWQAVGCSIGAYQRALAYAKEREQFGRPIGGFQLVQDLLVKMLGNITASL
CLVAQLSRLQDAQKMTEEQASLAKAFCTTKMRETVGMARELMGGNGILLEFDVGRFVADA
EAIHSYEGTREMNTLIVGRALTGLSAFV
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggacaccacggacttctacgcactggccgacgacctcccggacgaggaccgcgacctg
ctgacccggttgcgcgggttcctcgactccgaactcgcgcccgtcgcgaactggcactgg
gcccgcgagcgcttcccccaccacctcgtcgagccgctgggcaagctcgacgtcggcggg
ttgtcgtacaccggttacggcctgcccggccgcaccagcctgctggacggcttcgtcacc
ctcgacctcgcccgcaccgacccgtcgttcgccacgttcttcggcgtgcacaccggcctc
gccatggggtcgatctacctgtgcggctccgaggagcagaaggcgaagtggctcccgccg
atgcaccgcttcgagaagatcggcgcgttcggcctgaccgaaccggacgtcggctcggcc
gcctcccgcggtctcaaaaccaccgcgcgccgcgaaggcgacgagtgggtcctgaacggc
gagaagaagtggatcggcaacgcgaccttcgccgatgtggtcgtcgtctgggccaaggac
gtcgaagacggccaggtcaagggcttcctcctggagcagggcacgccggggttcaccccc
accaagatcgagggcaagatcgcgctgcggagcgtgcagaacgcgcacatcctgctcgag
gactgccgcgtgccggaggccaaccggctgcagcacgcgaacaccttcgccgacaccgcc
gcggtgctgcggatgacgcgcacgtccgtcgcctggcaggccgtcggctgctccatcggc
gcctaccagcgggctctggcctacgccaaggagcgtgagcagttcggccggccgatcggc
gggttccagctcgtgcaggacctgctggtgaagatgctcggcaacatcaccgcgtcgctc
tgcctggtcgcgcagctgtcccggctgcaggacgcgcagaagatgaccgaggagcaggcc
tcgctggcgaaagccttctgcaccaccaagatgcgcgagaccgtcggcatggcccgtgag
ctcatgggcggcaacggaatcctgctcgagttcgacgtcggccggttcgtcgccgacgcc
gaagccatccactcctacgagggcacgcgcgaaatgaacaccctcatcgtcggccgggcc
ctcaccggcctgtccgccttcgtctga
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