Amycolatopsis mediterranei U32: AMED_6615
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Entry
AMED_6615 CDS
T01269
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AMED_6615 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amd03400
]
AMED_6615 (recO)
DNA repair and recombination proteins [BR:
amd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AMED_6615 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AMED_6615 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ADJ48341
UniProt:
A0A0H3DCB6
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All DBs
Position
complement(7298450..7299328)
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AA seq
292 aa
AA seq
DB search
MVNLYRDTGVVLRTHKLGEADRIVTLLTRRHGKVRAVAKGVRRTSSRFGARLEPFGHVDV
QFYTGRTLDVITQVETVDAFQLPLVADYQSYTAASAIAETADRLSAEEGEPVLKLYLLVV
GALRALADGTRDSSLVLDAFFLRAMSYAGWAPALTECARCGLPGPHTAFSVAAGGSMCQD
CRIAGCVHPAPEVLALLTALLHGEWPLAEATLPGTRRDASGLVAAHLQWHLERQLRSLPL
VERRPRENVTSGAAPRAGGSATRTPEGQVVTSGASPRAGGSATPESQVPPGQ
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtggtgaacctctaccgcgacaccggggtggtgttgcgcacgcacaagctgggtgaagcc
gaccggatcgtcaccctgctgacccggcggcacggcaaggtccgcgccgtggcgaagggc
gtgcggcgcacctcgtcgcgcttcggcgcccggctggagccgttcggccacgtcgacgtg
cagttctacaccgggcggacgctcgacgtgatcacccaggtcgagaccgtcgacgcgttc
cagctgccgctggtcgccgactaccagagctacaccgcggccagcgcgatcgccgaaacc
gcggaccggctctcggccgaagagggcgagccggtgctcaagctgtacctcctcgtcgtc
ggcgcgctgcgggcgctggccgacgggacgcgtgactcctccctcgtgctcgacgcgttc
ttcctccgcgcgatgtcctacgccggctgggcgcccgcgctcaccgaatgcgcccgctgc
ggcctgcccggcccgcacacggcgttcagcgtcgccgcgggcggctcgatgtgccaggac
tgccggatcgccggctgcgtgcaccccgcccccgaggtcctggccctgctcaccgccctg
ctgcacggcgaatggccgctggccgaggcgaccctgcccggcacccgccgcgacgcgagc
gggctggtcgcggcccacctgcagtggcacctggagcggcagctgaggtcgctgcccctg
gtcgagcgacgcccccgggagaacgtgacatccggggctgcgccccgggccgggggctcc
gccacccggacccccgaagggcaggtggtgacatccggggcttcgccccgggccgggggc
tccgccacccccgaaagccaggtaccgcccgggcagtag
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