Amycolatopsis mediterranei U32: AMED_6787
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Entry
AMED_6787 CDS
T01269
Name
(GenBank) two-component system sensor kinase
Organism
amd
Amycolatopsis mediterranei U32
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
Laminin_II
OKR_DC_1_N
ATG14
YscO-like
B12-binding
OmpH
FBF1
MAP7
Motif
Other DBs
NCBI-ProteinID:
ADJ48511
UniProt:
A0A0H3DCS3
LinkDB
All DBs
Position
7480669..7485309
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AA seq
1546 aa
AA seq
DB search
MTTESQSEAAALERVLVAVRDLGDGNFRRRLVPHGDGISAQLAVAFNDIAERNQRLVSEL
LRVRAAVGQEGRLSERLEGQVGPGGWTTAVDAVNGLVEDLTRPAIELERVLGGVADGDLS
QPMTLTLDGRPLQGAYATLAKTVNGLIAQLSRFAAEVTRLSREIAGEGRLGGQAVVPGVS
GTWRDLTDSVNFMADNLTEQVRNIAQVTTAVARGDLTQKINVDARGEILELKNTINTMVD
QLSAFADEVTRVSREVGSDGKLGGQAQVPGVAGTWRDLTDSVNLMADNLTDQVRGISQVA
TAVASGDLTKKIDVDARGEILQLKNTLNTMVDQLSAFAGEVTRVAREVGSEGKLGGQAEV
PGAAGTWRSLTDSVNQMADNLTDQVRNISHVTTAVAKGDLTQKITVDARGEFFELKTTMN
TMVDQLSAFADEVTRVAREVGTEGQLGGQAQVPGVAGTWRDLTGSVNFMANNLTTQVRNI
AQVATAVARGDLTQKIAVDARGEILELKTTLNTMVDQLSAFADEVTRVAREVGTEGKLGG
QATVPGVAGTWKDLTDNVNSMANNLTDQVRNIATVTAAVAKGDLTQKITVDARGEILELK
TTLNTMVDQLSAFADEVTRVAREVGTEGILGGQARVRGVAGTWKDLTDNVNVMADNLTDQ
VRNIATVASAVANGDLSKKIRIEAQGEVAALAETLNGMVETLRAFADEVTRVAREVGTEG
ILGGQARVPGVAGTWKDLTENVNFMAHNLTSQVRNISQVTTAVAKGDLTKKIDVDARGEI
LELKTTMNTMVDQLSAFASEVTRVAREVGTEGKLGGQAEVDGVSGTWQRLTESVNQLAGN
LTTQVRAIAQVATAVTAGDLTRHITVDASGEVADLKDNINQMIANLKETTRTNREQDWLK
TNLAQLSGRMQGHRDLASVAALILSELAPLVRAQQGAFFLARDDDRDGTVLECIAAYGLA
QSRAGLRFAMGESLIGQAAVDQRTVLVHNAPPEYALISSGLGSAAPVNLIVLPVLFQGEV
LGVLELASVNEFSTVHQDLLEQLRHTIGVNVNTILSNSRTEALLTESQRLAQELRARSEQ
LQAQQGELRRSNTELAEKAALLAQQNRDIEVKNSEIEQARQELEERAGQLTVASQYKTEF
MANMSHELRTPLNSALILAKLLSENPEGNLTEKQIQFAKTIYAAGSDLQQLINDILDLAK
VEAGRLDMQMSDITLPELVDYVESLCRPLTADKGLEFAVHIDPPVPGSVHTDEHRLQQIL
RNLLSNAAKFTDEGGVRLHIRSADPAEVEQEALRNAPGIIAFAVEDTGIGIPEEKLAVIF
EAFRQADGTTSRKYGGTGLGLNISQQLTELLGGELRVVSEPGVGSTFTLYLPVAAANLVD
PALTALSSPRLPAVPSTVLVAAPDVTPKRFHGEKVLVVDDDLRNVFALAAVLEQAGLEVI
YAETGVDGIRALERNEDTALVLMDVMMPELDGNATIAAIRAEAANADLPVIAVTAKATAE
DRARTLASGADDYITKPVDTDKLLDVIAASLEADAASTRDAASSTG
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atgacaacggaatcccagagcgaagcggccgcactggaacgggtgctggtcgcggtgcgg
gatctcggggacggcaacttccgccggcggctcgtcccgcacggcgacggcatctcggcg
cagctcgccgtcgcgttcaacgacatcgccgagcgcaaccagcggctggtcagcgagctg
ctgcgggtccgcgcggccgtcgggcaggaaggcaggctcagcgaacggctcgagggccag
gtcggtcccggcggctggaccaccgccgtcgacgccgtcaacggcctggtcgaggacctc
acccggccggcgatcgagctggagcgcgtgctcggcggggtcgccgacggcgacctgtcc
cagccgatgacgctgaccctcgacggacgcccgctgcagggcgcgtacgccacgctggcc
aagacggtcaacggcctcatcgcgcagctctcgcggttcgccgccgaagtgacgaggctc
tcccgcgagatcgcgggtgagggacgtctcggtggccaggcggtcgtcccgggcgtgtcg
ggcacctggcgcgacctgaccgactcggtcaacttcatggccgacaacctcaccgagcag
gtccgcaacatcgcccaggtcaccaccgccgtcgcccgcggcgacctgacccagaagatc
aacgtcgacgcccgcggcgagatcctcgagctcaagaacaccatcaacaccatggtcgac
cagctctcggcgttcgccgacgaggtcacccgcgtctcccgcgaggtcggttcggacggc
aagctcggcggccaggcgcaggtgccgggcgtcgccgggacgtggcgcgacctcaccgac
tcggtaaacctgatggccgacaacctcaccgaccaggtccgcgggatctcgcaggtcgcg
accgcggtggccagcggcgacctgacgaagaagatcgacgtcgacgcgcgcggcgagatc
ctgcagctgaagaacacgctgaacacgatggtcgaccagctctcggcgttcgccggcgaa
gtgacccgggtggcgcgcgaggtcggcagcgagggcaagctgggcgggcaggccgaggtg
ccgggcgcggccgggacgtggcgcagcctcaccgactcggtcaaccagatggccgacaac
ctcaccgaccaggtccgcaacatctcgcacgtgaccaccgccgtggcgaagggcgacctg
acccagaagatcaccgtcgacgcccgcggcgagttcttcgagctcaagacgacgatgaac
acgatggtggaccagctgtccgccttcgccgacgaagtcacccgagtggcgcgcgaagtc
ggcaccgagggtcagctgggcgggcaggcgcaggtccccggcgtcgccggcacctggcgc
gacctcaccggctcggtgaacttcatggcgaacaacctgaccacccaggtccgcaacatc
gcccaggtcgcgacggccgtggcccgtggcgacctgacccagaagatcgcggtggacgcc
cgcggcgagatcctggaactcaagaccacgctgaacacgatggtggaccagctgtccgcg
ttcgcggacgaagtcacccgagtggcgcgcgaagtcggcaccgaaggcaagctcggcggc
caggcgaccgtgccgggtgtggccgggacgtggaaggacctcaccgacaacgtcaactcg
atggcgaacaacctgaccgaccaggtccggaacatcgccacggtgacggcggcggtcgcg
aagggcgacctgacccagaagatcaccgtcgacgcccgcggcgagatcctcgagctcaag
acgacgctgaacacgatggtggatcagctgtccgcgttcgcggacgaagtcacccgagtg
gcgcgcgaagtcggcaccgaaggcatcctcggcggccaggcccgcgtccgcggcgtggcg
ggcacgtggaaggacctcaccgacaacgtcaacgtcatggccgacaacctgaccgaccag
gtgcgcaacatcgcgaccgtggcgagcgcggtggccaacggcgacctgtcgaagaagatc
cggatcgaggcccagggcgaggtcgcggcgctggccgagacgctgaacggcatggtcgag
acgctgcgcgcgttcgccgacgaggtcacccgcgtcgcccgcgaggtcggcaccgaaggc
atcctcggcggccaggcccgcgtgcccggtgtcgccgggacctggaaggacctgaccgag
aacgtcaacttcatggcgcacaacctgaccagccaggtgcgcaacatctcgcaggtcacc
accgcggtcgcgaagggcgacctgacgaagaagatcgacgtcgacgcccgcggcgaaatc
ctcgagctcaagacgaccatgaacacgatggtcgaccagctctcggcgttcgcctccgaa
gtcacccgcgtcgcgcgcgaggtcggcaccgaaggcaagctgggcggccaggccgaggtc
gacggcgtgtccggcacctggcagcggctcaccgaaagcgtgaaccagctcgccgggaac
ctgaccacccaggtccgcgcgatcgcgcaggtggcgacggcggtgacggccggcgacctg
acccggcacatcacggtcgacgcgtccggcgaggtcgccgacctcaaggacaacatcaac
cagatgatcgcgaacctcaaggaaacgacgaggaccaaccgcgagcaggactggctgaag
acgaacctcgcgcagctgtcgggccggatgcagggtcatcgggacctggcgtcggtcgcg
gcgctgatcctgtccgagctggccccgctggtccgggcgcagcagggcgcgttcttcctg
gcccgcgacgacgaccgcgacggcacggtgctcgagtgcatcgccgcgtacgggctggcg
cagtcgcgcgccgggctgcggttcgcgatgggcgagtcgctgatcggccaggccgccgtc
gaccagcgcacggtgctggtgcacaacgcgccgccggagtacgcgctgatttcgtccggg
ctcggctcggccgcgccggtgaacctgatcgtgctgccggtgctgttccagggcgaggtg
ctcggggtgctggagctggcctcggtgaacgagttcagcacggtccaccaggacctgctg
gagcagctgcggcacacgatcggcgtcaacgtgaacacgatcctgtcgaactcgcggacc
gaggcgctgctgacggagtcgcagcggctggcgcaggagctgcgggcgcgctcggagcag
ctgcaggcccagcagggcgagctgcggcggtccaacaccgagctggccgagaaggccgcg
ctgctggcccagcagaaccgcgacatcgaggtcaagaacagcgagatcgagcaggcgcgt
caggagctcgaggagcgcgccgggcagctgacggtggcgtcgcagtacaagaccgagttc
atggcgaacatgtcgcacgagctgcggacgccgttgaacagcgcgctgatcctggcgaag
ctgctgtcggagaacccggaaggcaacctgacggagaagcagatccagttcgcgaagacg
atctacgcggccgggtcggacctgcagcagctgatcaacgacatcctggacctggccaag
gtcgaggcgggccggctggacatgcagatgtccgacatcacgctgccggagctggtggac
tacgtcgagtcgctgtgccggccgctgaccgcggacaagggcctggagttcgccgtccac
atcgacccgccggtgcccgggagcgtccacacggacgagcaccggctccagcagatcctg
cgcaacctgctgtcgaacgcggcgaagttcaccgacgagggcggcgtccgcctccacatc
cggtcggcggacccggcggaggtggagcaggaggcgctgcggaacgcgccgggcatcatc
gcgttcgccgtcgaggacaccgggatcggcatcccggaggagaagctggcggtcatcttc
gaggcgttccgccaggcggacggcacgacgagccgcaagtacggcggcacgggcctcggg
ctgaacatcagccagcagctgacggagctgctgggcggcgagctgcgcgtggtgagcgag
ccgggcgtgggatcgacgttcacgctgtacctcccggtggcggcggccaacctggtggat
ccggccctgacggcgctgtcttcgccccggctgccggccgtacccagcacggtgctggtg
gccgccccggacgtgacgcccaagcgcttccacggcgaaaaggtcctggtcgtcgacgac
gacctgcggaacgtgttcgccctggcggcggtcctggagcaggcgggcctggaagtgatc
tacgccgagacgggcgtcgacggcatccgcgccttggagcgcaacgaggacacggccctg
gtcctgatggacgtgatgatgccggagctggacggaaacgcaacgatcgcggccatcagg
gcggaggcggccaacgcggacctgccggtgatcgcggtgacggccaaggccacggcggag
gaccgggctcgcaccctggccagcggcgcggacgactacatcaccaagccggtggacacg
gacaagctgctggacgtgatcgcggcatcgttggaggcggacgccgcctcgacccgcgac
gccgcctcttcgacaggctga
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