Amycolatopsis mediterranei U32: AMED_6934 Help Entry AMED_6934         CDS       T01269                                  Symbol pdhD Name (GenBank) dihydrolipoamide dehydrogenase   KO K00382   dihydrolipoyl dehydrogenase [EC:1.8.1.4] Organism amd  Amycolatopsis mediterranei U32 Pathway amd00010   Glycolysis / Gluconeogenesis amd00020   Citrate cycle (TCA cycle) amd00260   Glycine, serine and threonine metabolism amd00280   Valine, leucine and isoleucine degradation amd00310   Lysine degradation amd00380   Tryptophan metabolism amd00620   Pyruvate metabolism amd00630   Glyoxylate and dicarboxylate metabolism amd00640   Propanoate metabolism amd00670   One carbon pool by folate amd00785   Lipoic acid metabolism amd01100   Metabolic pathways amd01110   Biosynthesis of secondary metabolites amd01120   Microbial metabolism in diverse environments amd01200   Carbon metabolism amd01210   2-Oxocarboxylic acid metabolism amd01240   Biosynthesis of cofactors Module amd_M00009   Citrate cycle (TCA cycle, Krebs cycle) amd_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate amd_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA amd_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA amd_M00621   Glycine cleavage system Brite KEGG Orthology (KO) [BR:amd00001]  09100 Metabolism   09101 Carbohydrate metabolism    00010 Glycolysis / Gluconeogenesis     AMED_6934 (pdhD)    00020 Citrate cycle (TCA cycle)     AMED_6934 (pdhD)    00620 Pyruvate metabolism     AMED_6934 (pdhD)    00630 Glyoxylate and dicarboxylate metabolism     AMED_6934 (pdhD)    00640 Propanoate metabolism     AMED_6934 (pdhD)   09105 Amino acid metabolism    00260 Glycine, serine and threonine metabolism     AMED_6934 (pdhD)    00280 Valine, leucine and isoleucine degradation     AMED_6934 (pdhD)    00310 Lysine degradation     AMED_6934 (pdhD)    00380 Tryptophan metabolism     AMED_6934 (pdhD)   09108 Metabolism of cofactors and vitamins    00785 Lipoic acid metabolism     AMED_6934 (pdhD)    00670 One carbon pool by folate     AMED_6934 (pdhD)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:amd04147]     AMED_6934 (pdhD) Enzymes [BR:amd01000]  1. Oxidoreductases   1.8  Acting on a sulfur group of donors    1.8.1  With NAD+ or NADP+ as acceptor     1.8.1.4  dihydrolipoyl dehydrogenase      AMED_6934 (pdhD) Exosome [BR:amd04147]  Exosomal proteins   Exosomal proteins of breast cancer cells    AMED_6934 (pdhD) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 DAO FAD_binding_3 NAD_binding_8 GIDA 3HCDH_N Amino_oxidase ApbA FAD_oxidored FAD_binding_2 Motif Other DBs NCBI-ProteinID:  ADJ48653 UniProt:  A0A0H3DEX6 LinkDB All DBs Position complement(7662353..7663717) Genome browser AA seq 454 aa AA seqDB search MLGAGVGGYVAAIRASQLGLSAAVVEEKYWGGVCLNVGCIPSKALLRNAELAHVVTQEAK AFGISSDSPIKVDYTAAYERSRKVADGRVKGVHFLMKKNKITEFDGHGTFLDDHTLEVNG EQLTFGHCIIATGATTRLLPGTSRSSRVVTYEEQILSSELPSSIVIAGAGAIGVEFAYVL HNYGVDVTIVEFLDRMVPLEDAEVSAELARRYRKLGIKVLTSTRVESIDDSGSSVRVTVS SEKNGEQVLEADKVMQAIGFQPRVEGYGLDKTGVALTDRGAIAVDGRGRTNVEHIFAIGD VTAKLMLAHASESMGVVAAETIAGAETMELDFPMIPRATFCQPQIASFGWTEEQAREKGF DVQVAKFPFTANGKAQGLGDAGGFVKLISDARHGELIGGHLIGPDVTELLPELTLAQQWD LTVYEVARNVHAHPTLGEAVKEAVHGLAGHMINM NT seq 1365 nt NT seq  +upstreamnt  +downstreamnt gtgctgggggccggagtgggcggctacgtcgcggcgatccgcgcgtcccagctggggctg agcgccgcggtggtcgaggagaagtactggggtggcgtctgcctgaacgtcgggtgcatc ccgtcgaaggcgctgctgcgcaacgccgaactggcgcacgtggtgacgcaggaggcgaag gcgttcggcatctcctccgacagcccgatcaaggtcgactacacggccgcgtacgagcgg agccggaaggtcgccgacgggcgcgtcaagggcgtgcacttcctgatgaagaagaacaag atcaccgagttcgacgggcacggcaccttcctcgacgaccacaccctcgaggtgaacggc gagcagctcacgttcggccactgcatcatcgcgacgggcgcgaccacgcggctgctgccc gggacttcgcgcagttcccgggtggtcacctacgaagagcagatcctctcgagcgagctg ccgtcgagcatcgtgatcgccggcgcgggcgcgatcggcgtcgaattcgcctacgtgctg cacaactacggcgtcgacgtcacgatcgtcgagttcctcgaccggatggtgccgctggaa gacgccgaggtgtcggcggagctggcgcgccgctaccgcaagctcggcatcaaggtgctg acctcgacccgcgtcgagtcgatcgacgactcgggttcctccgtgcgggtgacggtgtcc tcggagaagaacggcgagcaggtcctcgaggccgacaaggtcatgcaggcgatcggcttc cagccgcgcgtggagggctacggcctggacaagacgggcgtcgccctgaccgaccgcggc gcgatcgccgtggacggccgcggccgcacgaacgtcgagcacatcttcgcgatcggcgac gtgacggcgaagctgatgctggcgcacgcgtcggagtcgatgggcgtggtggcggcggag acgatcgcgggcgcggagacgatggaactcgacttcccgatgatcccgcgcgcgacgttc tgccagccccagatcgccagcttcggctggacggaggagcaggcccgcgagaagggcttc gacgtccaggtggcgaagttcccgttcacggccaacggcaaggcccaggggctgggcgac gcgggcgggttcgtgaagctgatcagcgacgctcggcacggggagctgatcggcgggcac ctgatcggcccggacgtgacggagctgctgccggagctgacgctggctcagcagtgggac ctgacggtgtacgaggtggcccggaacgtgcacgctcacccgacgctgggtgaagcggtg aaggaagcggtccacggcctcgccggtcacatgatcaacatgtag

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