Amycolatopsis mediterranei U32: AMED_7047
Help
Entry
AMED_7047 CDS
T01269
Symbol
cobU
Name
(GenBank) nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
KO
K00768
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:
2.4.2.21
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00860
Porphyrin metabolism
amd01100
Metabolic pathways
amd01240
Biosynthesis of cofactors
Module
amd_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
AMED_7047 (cobU)
Enzymes [BR:
amd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.21 nicotinate-nucleotide---dimethylbenzimidazole phosphoribosyltransferase
AMED_7047 (cobU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBI_PRT
Motif
Other DBs
NCBI-ProteinID:
ADJ48765
UniProt:
A0A0H3DCX0
LinkDB
All DBs
Position
7787971..7788984
Genome browser
AA seq
337 aa
AA seq
DB search
MFDVPVPDPAARTAALERLDGLVKPLGALGRLEEIAAWLAAAHGTVPPRPLDDVRVVVFA
GDHGVSALSAYPREVTAAMVRVFLAGKSGVNVLAAQVGARVRVADIAVDWDGADVPASVT
AHKIRRGSGSIDVEDALLPGEAQAAFEAGRAIALEEREADVLIPGDMGIGNTAMCAALVA
ASLGLPATEVVGTGTGVDAAGLERKTAAVAAALTRTAGRTEDPFERLTALGSACMAATAG
FLVQAAVLGIPVLLDGVFSGAAALVARDIAPGAEQWWLAGHRSTEPSQAFALKALGLEPI
LDFGLRLGEGSGAVQAVPTLRAARAILAEMGLLADLA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacgtacccgtgcccgaccccgccgcccgcaccgccgccctggagcggctcgac
ggcctggtcaagccgctcggcgcgctgggcaggctggaggagatcgccgcctggctcgcg
gcggcgcatggcaccgtgccgccgcgtccgctggacgacgtccgcgtggtcgtcttcgcg
ggcgaccacggcgtgtcggcgctttcggcgtacccgcgcgaggtgaccgcggcgatggtg
cgggtgttcctggccgggaagagcggcgtgaacgtgctggccgcccaggtcggggcgcgc
gtgcgggtcgcggacatcgccgtcgactgggacggcgcggacgtgccggcgtcggtgacg
gcgcacaagatccgccgcggttcgggctcgatcgacgtcgaggacgcgctgctgccgggc
gaagcccaggcggcgttcgaagcgggccgggcgatcgccctggaggaacgcgaggcggac
gtcctgatcccgggcgacatgggaatcggcaacacggcgatgtgcgcggcgctggtggcg
gcctccctcggcctgccggcgacggaggtcgtcggcacgggaacgggcgtcgacgcggcg
ggcctggagcgcaagacggcggcggtcgcggcggccttgacgcggacggcgggccggacg
gaggacccgttcgagcggctgacggcgctgggcagtgcctgcatggcggcgacggcgggc
ttcctggtccaggcggcggtgctgggaattccggtgttgctggacggggtcttttccggc
gcggcggcgctggtggcgcgggacatcgcgccgggggcggagcagtggtggctggccggg
caccgttcgacggaaccttcgcaggcgttcgcgttgaaggccttggggctggagccgatc
ctggacttcggcctgcggctgggcgaaggcagcggcgctgtccaggctgtgccgaccctg
cgagcggcccgggcgattctggccgaaatgggcctgttggccgacctggcatga
DBGET
integrated database retrieval system
