Amycolatopsis mediterranei U32: AMED_7419
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Entry
AMED_7419 CDS
T01269
Name
(GenBank) periplasmic substrate-binding component of ABC-type sugar transport system
KO
K25676
pectin-derived oligosaccharide transport system substrate-binding protein
Organism
amd
Amycolatopsis mediterranei U32
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amd02000
]
AMED_7419
Transporters [BR:
amd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Pectin-derived oligosaccharide transporter
AMED_7419
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
Cucumo_coat
Motif
Other DBs
NCBI-ProteinID:
ADJ49133
UniProt:
A0A0H3DG83
LinkDB
All DBs
Position
complement(8197754..8199040)
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AA seq
428 aa
AA seq
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MNGRFGLRAALTAVVAVTLAGLVTGCGGGGDASGPTTIRFVWWGNEDRAKVTKAAVDLFM
KDNPGITVQTEYAAYDAYFQKLSTQVAGGASPDLIQLDRATLGEYQHRHVLEDLSPYMGK
AVDVTGIAPALLAGGKIEGKQYAVPGGQTTQMLAYDAGVFTKAGVAPPSGPGKTWTWAQF
GEGLRKVAATGVAGTTDFGWAIDWFEVWLHQHGKQLYTDDGKLGFTAADLTQFWTLTGDL
RAAKAVTAPEVTTKMDGSMPNSGLVTKRAGSEINYDSSLSAYLSSYGPGIQAAPLPTDGT
ASGMAAMPPVTFAVAQRSAHKEAAAKLLSFLVNNPEAGKLLGVARGLPPNTAIREQVCGA
AQAATKAVCDYEKSVADRIGPATGLWPTGSAAVKRDFQRVYDDVIFGRTGVADGAARAVQ
TAQQSLGS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaacggacggttcgggctgcgcgccgccctgacggcggtcgtggcggtcacgctggcg
ggactggtcaccgggtgcggtggcggcggcgacgcgtcggggcccacgacgatccgcttc
gtctggtggggcaacgaagaccgggccaaggtcacgaaggccgcggtggacctgttcatg
aaggacaatccgggcatcaccgtccagacggagtacgccgcgtacgacgcctacttccag
aagctctcgacccaggtcgccggcggcgcgtcgccggacctgatccagctggaccgcgcg
acgctcggcgagtaccagcaccggcacgtgctcgaggacctgagcccgtacatgggcaag
gcggtcgacgtcaccgggatcgcgcccgcgctgctggccggcgggaagatcgaggggaag
cagtacgccgtgcccggcggccagaccacgcagatgctcgcctacgacgcgggcgtcttc
acgaaggcgggcgtcgcaccgccgtccgggcccggcaagacctggacctgggcacagttc
ggcgagggcctgcgcaaggtggccgcgaccggggtggccgggactaccgacttcggctgg
gcgatcgactggttcgaagtctggctgcaccagcacggcaagcagctctacaccgacgac
ggcaagctcgggttcaccgccgccgacctgacgcagttctggacgctgaccggcgacctg
cgcgcggccaaggccgtcaccgcgcccgaggtcaccacgaagatggacggctcgatgccg
aactccggcctggtcaccaagcgcgccgggtcggagatcaactacgactccagcctgagc
gcgtatctgtcgagctacggcccggggatccaggcggcaccgctgcccaccgacggcacg
gcgtccggcatggccgcgatgccgccggtcaccttcgccgtcgcgcaacgctcggcccac
aaggaggccgccgccaagctgctgagcttcttggtcaacaaccccgaagccgggaagctg
ctgggcgtggcgcgggggctgccgccgaacacggcgatccgcgagcaggtctgcggcgcg
gctcaagcggccacgaaggcggtgtgcgactacgaaaagtcggtcgccgaccggatcggg
ccggcgaccggcctgtggcccaccgggtccgcggcggtgaagcgcgatttccagcgcgtc
tacgacgacgtgatcttcggccgcacgggtgtcgccgacggggccgcgcgcgcggtgcag
accgcgcagcagtcgctcggatcctga
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