Amycolatopsis mediterranei U32: AMED_7554
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Entry
AMED_7554 CDS
T01269
Symbol
glyA
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00260
Glycine, serine and threonine metabolism
amd00460
Cyanoamino acid metabolism
amd00630
Glyoxylate and dicarboxylate metabolism
amd00670
One carbon pool by folate
amd00680
Methane metabolism
amd01100
Metabolic pathways
amd01110
Biosynthesis of secondary metabolites
amd01120
Microbial metabolism in diverse environments
amd01200
Carbon metabolism
amd01230
Biosynthesis of amino acids
amd01240
Biosynthesis of cofactors
amd04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AMED_7554 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AMED_7554 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AMED_7554 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AMED_7554 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AMED_7554 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AMED_7554 (glyA)
Enzymes [BR:
amd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AMED_7554 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ADJ49267
UniProt:
A0A0H3DGH0
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All DBs
Position
complement(8344978..8346240)
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AA seq
420 aa
AA seq
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MPSMLNRSLADYDPAVAEAIGAELRRQQTTLEMIASENFAPLSVLQAQGSVLTNKYAEGY
PGRRYYGGCEQVDVTEQLAIDRVKELFGAGFANVQPHSGAQANAAAMAALLKPGDQILGL
SLAHGGHLTHGMRINFSGLLYDVAAYEVSEKDYRVDMAEVERLAKEHRPKLIIAGWSAYP
RQLDFARFREIADEVGAYLMVDMAHFAGLVAAGLHPSPVPHAHVTTTTTHKTLGGPRGGV
VLTDDPALAKKVNSAVFPGQQGGPLEHVIAAKAVAFKMAAEPEFAERQQRTLRGAKLLAE
RLLAEPDISVLTGGTDVHLVLVDLRNSELDGKQAEDRLHEVGITVNRNAVPFDPRPPMVT
SGLRIGTPALATRGFGDAEFREAADVIAEALRPGYDVDKLRARVTALAEAFPLYPSEEAR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgatgctcaaccgctccttggccgactacgacccggcggtggccgaagcgatc
ggcgccgagctgcgccggcagcagacgacgctggagatgatcgcgtccgagaacttcgcg
ccgctcagcgtgctccaggcccaggggtcggtgctcaccaacaagtacgccgagggctac
ccgggccgccgctactacggcggctgcgagcaagtcgacgtcaccgaacagctcgccatc
gaccgggtcaaggagctcttcggcgccgggttcgccaacgtccagccgcactcgggcgcg
caggccaacgccgccgcgatggccgcgctgctcaagcccggcgaccagatcctcggcctg
tcactggcccacggcgggcacctgacccacggcatgcggatcaacttctccggcctgctc
tacgacgtcgccgcctacgaagtgtccgaaaaggactaccgggtggacatggccgaggtc
gagcggctggcgaaggaacaccggccgaagctgatcatcgccggctggtcggcctacccg
cggcagctcgacttcgcccgcttccgcgagatcgccgacgaggtcggcgcgtacctcatg
gtcgacatggcgcacttcgccggactggtcgccgccgggctgcacccgtcgccggtcccg
cacgcgcacgtcacgacgaccaccacgcacaagactctcggcggcccgcgcggcggcgtg
gtcctcaccgacgatcccgcgctggccaagaaggtcaactcggccgttttccccggtcag
cagggcggtccgctcgaacacgtcatcgccgcgaaggccgtcgcgttcaagatggccgcc
gagccggagttcgccgaacgccagcagcgcaccctgcgcggcgcgaagctcctcgccgag
cggctgctggccgagccggacatctccgtgctgaccggcggcaccgacgtccacctcgtg
ctcgtcgacctgcggaactccgaactcgacggcaagcaggccgaggaccggctccacgaa
gtgggcatcacggtgaaccgcaacgccgtcccgttcgacccgcggccgccgatggtgacg
tccgggctccgcatcggcaccccggcactggccacccgcgggttcggggacgccgagttc
cgcgaggccgccgacgtcatcgccgaggcgctccggcccggctacgacgtcgacaagctg
cgggcccgcgtcaccgcgctggccgaagcgttcccgctgtacccgtcggaggaggcccga
tga
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