Amycolatopsis mediterranei U32: AMED_7893 Help Entry AMED_7893         CDS       T01269                                  Symbol fadB Name (GenBank) 3-hydroxyacyl-CoA dehydrogenase   KO K01782   3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] Organism amd  Amycolatopsis mediterranei U32 Pathway amd00071   Fatty acid degradation amd00280   Valine, leucine and isoleucine degradation amd00310   Lysine degradation amd00362   Benzoate degradation amd00380   Tryptophan metabolism amd00410   beta-Alanine metabolism amd00640   Propanoate metabolism amd00650   Butanoate metabolism amd00907   Pinene, camphor and geraniol degradation amd00930   Caprolactam degradation amd01100   Metabolic pathways amd01110   Biosynthesis of secondary metabolites amd01120   Microbial metabolism in diverse environments amd01200   Carbon metabolism amd01212   Fatty acid metabolism Module amd_M00087   beta-Oxidation amd_M00957   Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA Brite KEGG Orthology (KO) [BR:amd00001]  09100 Metabolism   09101 Carbohydrate metabolism    00640 Propanoate metabolism     AMED_7893 (fadB)    00650 Butanoate metabolism     AMED_7893 (fadB)   09103 Lipid metabolism    00071 Fatty acid degradation     AMED_7893 (fadB)   09105 Amino acid metabolism    00280 Valine, leucine and isoleucine degradation     AMED_7893 (fadB)    00310 Lysine degradation     AMED_7893 (fadB)    00380 Tryptophan metabolism     AMED_7893 (fadB)   09106 Metabolism of other amino acids    00410 beta-Alanine metabolism     AMED_7893 (fadB)   09109 Metabolism of terpenoids and polyketides    00907 Pinene, camphor and geraniol degradation     AMED_7893 (fadB)   09111 Xenobiotics biodegradation and metabolism    00362 Benzoate degradation     AMED_7893 (fadB)    00930 Caprolactam degradation     AMED_7893 (fadB) Enzymes [BR:amd01000]  1. Oxidoreductases   1.1  Acting on the CH-OH group of donors    1.1.1  With NAD+ or NADP+ as acceptor     1.1.1.35  3-hydroxyacyl-CoA dehydrogenase      AMED_7893 (fadB)  4. Lyases   4.2  Carbon-oxygen lyases    4.2.1  Hydro-lyases     4.2.1.17  enoyl-CoA hydratase      AMED_7893 (fadB)  5. Isomerases   5.1  Racemases and epimerases    5.1.2  Acting on hydroxy acids and derivatives     5.1.2.3  3-hydroxybutyryl-CoA epimerase      AMED_7893 (fadB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  3HCDH_N ECH_1 3HCDH ECH_2 UDPG_MGDP_dh_N DAO NAD_binding_2 F420_oxidored 2-Hacid_dh_C AlaDh_PNT_C NAD_Gly3P_dh_N NAD_binding_8 Motif Other DBs NCBI-ProteinID:  ADJ49599 UniProt:  A0A0H3DIU1 LinkDB All DBs Position complement(8683908..8686079) Genome browser AA seq 723 aa AA seqDB search MAESKTIRWDQDSDGIVTLTLDDPNQSANTMNAAFRESLGVTVDRLEAEKDSITGVVITS AKKTFFAGGDLNDLIQAKPEHAAELTEGSSLMKGQMRRIEQLGKPVVAAINGAALGGGLE IALATHHRIAADVKGSQIGLPEVTLGLLPGGGGVVRTVRLLGIQSALLNVLLQGQRHRPA KALELGLVHELVGSVEELVPAAKAWIKANPEGGVQPWDVKGYKIPGGTPSNPSFAANLPA FPANLRKQIKGANMPAPRAILAAAIEGAQVDVDTALQIETRYFIHLATGQVSKNMTKAFF FDLQTINSGGSRPDGFEKYTAKKVGVLGAGMMGAAIAYVSAKAGIDVVLKDVSLEAAEKG KSYAVKLEEKALSRGKTTQEKSDALLAKIKPTGDPADFAGVDFVIEAVFESVELKHKVFG EIESVVNADAVLGSNTSTLPITTLAEGVQRTEDFIGIHFFSPVDKMPLVEIICGEKTSPA TLAKVFDYTLQIKKTPIVVNDSRGFFTSRVIGTFINEAVAALGEGVEPASIEQAGAQAGY PAPPLQLMDELTLTLPRKIRKETREAVEAAGGTWKAHASESVIDRMVEEFDRKGRSTGAG FYEYDENGKRTGLWPGLRDAFKSGSAEVPFEDLKERMLFAEALETVKCFDEGVLTSVADA NIGSIFGIGFPAWTGGVIQYINQYEGGLQGFVDRSRELAARYGDHFEPPASLVEKAAKGE IYE NT seq 2172 nt NT seq  +upstreamnt  +downstreamnt atggccgagagcaagaccatccgctgggaccaggactccgacggcatcgtcaccctgacc ctggacgacccgaaccagtcggcgaacacgatgaacgccgccttccgcgagtcgctgggc gtcaccgtcgaccgcctggaggccgagaaggactccatcaccggcgtcgtcatcacgtcc gccaagaagacgttcttcgccggcggcgacctgaacgacctgatccaggcgaagcccgag cacgcggccgagctgaccgagggcagctccctgatgaaggggcagatgcgccggatcgag cagctcggcaagccggtcgtcgcggcgatcaacggcgccgcgctcggcggtggcctggag atcgcgctggcgacgcaccaccgcatcgccgccgacgtcaagggcagccagatcggcttg cccgaggtgacgctgggcctgctgcccggcggcggtggcgtggtccgcaccgtgcggctg ctcggcatccagagcgcgctgctgaacgtcctgctgcagggccagcggcaccgcccggcc aaggcgctcgagctcggcctggtgcacgaactcgtcggttcggttgaagagctcgttccc gccgcgaaggcgtggatcaaggcgaaccccgagggcggcgtgcagccgtgggacgtcaag ggctacaagatccccggcggcaccccgtcgaacccgagcttcgcggccaacctgccggcg ttcccggcgaacctgcgcaagcagatcaagggcgcgaacatgccggcgccgcgggcgatc ctggccgccgcgatcgagggcgcgcaggtcgacgtcgacaccgcgctccagatcgagacg cgctacttcatccacctcgccaccggccaggtctcgaagaacatgacgaaggcgttcttc ttcgacctgcagaccatcaactccggcggctcgcggcccgacggcttcgagaagtacacc gcgaagaaggtgggtgtgctcggcgccgggatgatgggtgccgcgatcgcgtacgtgtcg gcgaaggccggtatcgacgtcgtcctcaaggacgtctcgctcgaggcggccgaaaagggc aagagctacgcggtcaagctcgaggagaaggccctctcgcgcggcaagaccacgcaggag aagtcggacgcactgctggcgaagatcaagccgaccggtgacccggccgacttcgcgggc gtcgacttcgtcatcgaggccgtcttcgagagcgtcgagctgaagcacaaggtgttcggc gagatcgaaagcgtcgtcaacgccgacgcggtgctgggttccaacacctcgaccctgccg atcaccacgctcgccgagggcgtgcagcggaccgaggacttcatcgggatccacttcttc tcgccggtggacaagatgccgctggtcgagatcatctgcggtgagaagacgtcgccggcc acgctggccaaggtcttcgactacacgctgcagatcaagaagaccccgatcgtcgtcaac gacagccgcggcttcttcacctcgcgggtgatcggcacgttcatcaacgaggccgtcgcc gcgctgggcgagggtgtcgagccggcgtcgatcgagcaggcgggtgcgcaggcgggctac ccggcgccgccgctgcagctgatggacgagctgacgctgaccctgccgcgcaagatccgc aaggagacccgcgaggcggtcgaggccgcgggcggcacgtggaaggcgcacgcgtcggag tccgtgatcgaccggatggtcgaggagttcgaccgcaagggccggtcgacgggcgcgggc ttctacgagtacgacgaaaacggcaagcgcaccgggctgtggccggggctgcgtgacgcg ttcaagtcgggctcggccgaggtgccgttcgaggacctcaaggagcggatgctcttcgcc gaggcgctcgagacggtcaagtgcttcgacgagggtgtgctgacgtcggtggccgacgcc aacatcggctcgatcttcggcatcggcttcccggcctggacgggcggcgtcatccagtac atcaaccagtacgagggtggcctgcagggcttcgtcgaccggtcccgcgagctggccgcc cggtacggcgaccacttcgagccgccggcttcgctggtggagaaggccgccaagggcgag atctacgaataa

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