Amycolatopsis mediterranei U32: AMED_7962
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Entry
AMED_7962 CDS
T01269
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K16438
5-epimerase [EC:5.1.3.-]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00523
Polyketide sugar unit biosynthesis
amd01055
Biosynthesis of vancomycin group antibiotics
amd01100
Metabolic pathways
amd01110
Biosynthesis of secondary metabolites
amd01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
AMED_7962 (rfbC)
01055 Biosynthesis of vancomycin group antibiotics
AMED_7962 (rfbC)
09110 Biosynthesis of other secondary metabolites
00404 Staurosporine biosynthesis
AMED_7962 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ADJ49667
UniProt:
A0A0H3DHJ4
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Position
8763221..8763826
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AA seq
201 aa
AA seq
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MQFRRLSVPDAYEFSPRAFPDDRGLFVAPFQEDVFRDAVGHSLRLGQANHSVSRRGTIRG
IHFADTPPGQAKYVYCPRGSLLDVVVDIRVGSPTFGRWDAVVLDSREFRAMYLAEGLGHG
FVALEDDTVMTYICSEPYNPAGEHGITPLDPVLDLPWPADIAQVLSDKDRIAPTLAEARE
QGLLPVYADCVAYYDKLRSAH
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgcaattccgccggctgagcgtcccggacgcctacgagttctccccccgggcgttcccc
gacgaccgagggctgttcgtcgcccccttccaggaggacgtcttccgcgacgcggtcggc
cactcgctgcggctcggccaggcgaaccacagcgtgtcccgccgcggcaccatccgcggc
atccacttcgccgacaccccgccgggccaggccaagtacgtctactgcccgcgcgggtcg
ctgctcgacgtcgtcgtcgacatccgcgtcggttcgccgacgttcggccggtgggacgcg
gtcgtgctcgactcgcgcgagttccgcgccatgtacctcgccgaagggctcggccacggc
ttcgtcgccctggaggacgacaccgtgatgacctacatctgctcggagccgtacaacccg
gcgggcgagcacggcatcaccccgctcgacccggtgctggacctgccgtggcccgcggac
atcgcgcaggtcctgtcggacaaggaccgcatcgcgccgaccttggccgaagcccgggaa
cagggccttctcccggtgtacgcggactgcgtcgcctactacgacaagctccgctcggcc
cactga
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